Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00162 |
Symbol | |
ID | 6305190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 1710296 |
End bp | 1711087 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642638961 |
Product | lipoprotein |
Protein accession | YP_001912837 |
Protein GI | 188575908 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.989449 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAAGACA ACGAACGGAT GAGCAAGACG CAGATGAATT CGGTACGCAA GACAGCAGTC ATGCTCGCAG TGGCCATTGG GCTCACCGCC TGCAGCAGCG CCACGGTGGT GCGTTCGCCT GGGGCGAGTG GTGGTTCGTC GTCGCGTCCA AGCACGGCGC CACGCCCGTC GCTGCCACGC CCGGGTGCCA CGGTGACCGT CCAGCGCGGC GATACCCTGT ATGCGATCTC GCGCCGGACC AATATCACTG CCGCGGACCT GGCAGCCTGG AACGGCCTGT CGTCGCCGAA TACCATCTAT CCCGGCCAGA CCCTCAAGCT GTATCCCGAC GGGGCGAGCA AGCCCGGCAG CAGTGCGCCG GTTGCCGGCA GCGTGGCTCC GCCGCGTCCG GCTGCGCCGA TCGCCGCACC GGTCAGCAGT GGATTCTCCT GGCGTTGGCC GGCCGATGGC GTGGTCGTCG GCACCTTCGT CACTGGCGAA ACCACCAGGC AGGGCGTGGA CATCGCCGGT GCCAGCGGCC AGGCCGTGCG CGCGGCCGCT GACGGCGTGG TGGTGTATTC CGGTGCCGGC CTGGTCGGTT ACGGCGAGCT GATCATCATC AAGCACAACG ACCAGTGGCT ATCCGCGTAC GGGCACAACC GCAAGCGTTT GCTGAACGAA GGCCAGAGCG TCAAGGCCGG GCAGCAGATT GCAGAAATGG GCCGCAGCGG TGCTTCCCGC GACATGCTGC ACTTCGAGAT CCGCTACAAC GGCAAGCCAG TGGATCCGTT GCTGTATTTG CCCAAGAAAT GA
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Protein sequence | MEDNERMSKT QMNSVRKTAV MLAVAIGLTA CSSATVVRSP GASGGSSSRP STAPRPSLPR PGATVTVQRG DTLYAISRRT NITAADLAAW NGLSSPNTIY PGQTLKLYPD GASKPGSSAP VAGSVAPPRP AAPIAAPVSS GFSWRWPADG VVVGTFVTGE TTRQGVDIAG ASGQAVRAAA DGVVVYSGAG LVGYGELIII KHNDQWLSAY GHNRKRLLNE GQSVKAGQQI AEMGRSGASR DMLHFEIRYN GKPVDPLLYL PKK
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