Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00159 |
Symbol | rrmJ |
ID | 6305193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 1712041 |
End bp | 1712673 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642638964 |
Product | ribosomal RNA large subunit methyltransferase J |
Protein accession | YP_001912840 |
Protein GI | 188575911 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0293] 23S rRNA methylase |
TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTCCC GCAGTAAAAG CAGCCAGCGC TGGCTCAAGG AACACTTCGC CGACCCTTAC GTGAAGAAGG CCCGGGCCGA GGGCATGCGC TCGCGCGCGG CGTACAAGCT GGAAGAGTTG CTGCAGCGCG ACCGCCTGCT CAAACCGGGC ATGGTGGTGG TCGATCTGGG CGCGGCCCCG GGCGGCTGGT CGCAGCAGGT GCGCAAGTCC ATGGGCGACA GCGGCCGGGT AGTGGCGCTG GATATCCTGG ACATGCCGGC CCTGGCGGGC GTGGAGTTCC TTCACGGCGA CTTCAGGGAG CAGGCCGTCC TATCGCAGTT CGAAGCGATG CTGGGCGATG TGCCGGTCGA CCTTGTTCTG TCCGATATGG CCCCCAATAA GAGTGGCATG GATGCGGTCG ACCAACCGCG GATGATGCAC CTGGCGGAAC TGGCGATGGA ATTTGCCGAC GCCCACCTCA AACCGGGCGG GGCGTTCCTA ATCAAGCTGT TCCAGGGTGT TGGGTCCGAC GACTACATTC GTGAGCTTCG CCGCCGCTAT GAGAAGGTGA CGATTCGCAA GCCGGCGGCC TCGCGCAAGC GCTCCCCGGA AGTTTATGCG CTCGGTCAGG GCAAGCGTGT CCAGATCAAG TAA
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Protein sequence | MPSRSKSSQR WLKEHFADPY VKKARAEGMR SRAAYKLEEL LQRDRLLKPG MVVVDLGAAP GGWSQQVRKS MGDSGRVVAL DILDMPALAG VEFLHGDFRE QAVLSQFEAM LGDVPVDLVL SDMAPNKSGM DAVDQPRMMH LAELAMEFAD AHLKPGGAFL IKLFQGVGSD DYIRELRRRY EKVTIRKPAA SRKRSPEVYA LGQGKRVQIK
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