Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00146 |
Symbol | csrA |
ID | 6305206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 1727065 |
End bp | 1727277 |
Gene Length | 213 bp |
Protein Length | 70 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642638977 |
Product | carbon storage regulator |
Protein accession | YP_001912853 |
Protein GI | 188575924 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) |
TIGRFAM ID | [TIGR00202] carbon storage regulator (csrA) |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.144727 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGATCC TCACTCGCCG GGTAGGCGAA ACCTTGATGA TCGGCGACTC GGTCACCGTG ACCGTTCTCG GCGTCAAGGG CAATCAGGTG CGCATCGGTA TCACCGCACC CAAGGATGTC GCTGTGCATC GTGAAGAAAT CTATCAGCGC ATCCAGCGTG GGGATGAGCC GGTCGCTTCC GGCGCACATC ACGGTGACGA TTCTTCGAAT TGA
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Protein sequence | MLILTRRVGE TLMIGDSVTV TVLGVKGNQV RIGITAPKDV AVHREEIYQR IQRGDEPVAS GAHHGDDSSN
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