| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00122 |
|---|
| Symbol | |
|---|
| ID | 6305236 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 1744160 |
|---|
| End bp | 1745071 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642639007 |
|---|
| Product | regucalcin |
|---|
| Protein accession | YP_001912880 |
|---|
| Protein GI | 188575951 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3386] Gluconolactonase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.235017 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAGCA CGTCCGAACA CACCGCCGTG CTGGCGGTCG ACAGCCGCTG CACGCACGGC
GAAGGCGTGC TGTGGTGCGC ACGGCGCGAG GCGCTGTACT GGGTCGACAT CAGCGAAAAA
CGCCTGTGGC GGCACCATCC GGCCAGTGCG CAATCGCGCC ACTGGACGCT GCCCGACCGC
CCGGGATGCA TCGGCCTGAT GGACGACGGT CGCGTGCTGG TCGCGCTGGC CAAGGCGATC
GGGATTGTCG ATCCGGACAC TATCGAAGAA GACGTGCTGC CCTTCGAAAA ACTGGCCGAC
GTGGAAGCGG ACAATCCGCT CACGCGCAGC AATGATGGTC GCGCCGATCG CAACGGCAAT
TTCGTATTCG GCACCATGGA CGAACACGAC ACCAAGGCCG CGCGCGGAGC GATGTACCAG
TTCTCGCTGA CGCATGGTTT GCGTGCATTG CCGCTGCCAG GCGTATCGAT CCCCAACTCG
ATCTGCTTCA GCCCCGACGG CCGCACGCTG TACTACTGCG ACTCGGCGCG CCCGCAGATC
CTGTGTTGCG ACTACGACGC GCAGACCGCG CAGACCAGCA ACACCCGCGT GTTCACCACG
TTAGACCGCG ACGATGCCGA ACCGGACGGA TCGATCATCG ATGCCGAAGG TCACCTGTGG
AATGCGCAAT GGCGCGCGTG GCGCGTAGTG CGCTATCGCC CCGATGGCAG CGTGGAGCGC
ATCGTGCAAC TGCCGGTCAA GCACCCCACC TGCAGCGCGT TCGGTGGCGC CGCGCTGGAC
CGCCTGCACG TGATCAGCTC GCGTCTGGAC CATAGCGCCG AGGAACTGGC CCGTACCCCT
GAAGCCGGCA GCTTGTACTG GTGCGATCTG CCGGTCGCGG GCTTGCCAGA GAGCTTGGTG
GCCAGCGCGT GA
|
|---|
| Protein sequence | MVSTSEHTAV LAVDSRCTHG EGVLWCARRE ALYWVDISEK RLWRHHPASA QSRHWTLPDR
PGCIGLMDDG RVLVALAKAI GIVDPDTIEE DVLPFEKLAD VEADNPLTRS NDGRADRNGN
FVFGTMDEHD TKAARGAMYQ FSLTHGLRAL PLPGVSIPNS ICFSPDGRTL YYCDSARPQI
LCCDYDAQTA QTSNTRVFTT LDRDDAEPDG SIIDAEGHLW NAQWRAWRVV RYRPDGSVER
IVQLPVKHPT CSAFGGAALD RLHVISSRLD HSAEELARTP EAGSLYWCDL PVAGLPESLV
ASA
|
|---|
| |