Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00121 |
Symbol | |
ID | 6305237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 1745065 |
End bp | 1746213 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642639008 |
Product | galactonate dehydratase |
Protein accession | YP_001912881 |
Protein GI | 188575952 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.220191 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATCA CCCGCCTCAC CACCTACCAC GCTGCGCCGC GCTGGTTGTT CCTCAAGGTC GAAACCGACG AGGGCATTAC CGGTTGGGGA GAGCCGGTTA TCGAAGGCCG CGCCCGTTCG GTGGAGGCCG CCGTACACGA ACTGGCCGGC TATGTCGTCG GCAAGGATCC GGCGCGCATC AACGACCTGT GGCAGACCAT GTACCGCGCC GGTTTCTACC GTGGCGGCGC CATCCTGATG AGCGCGATCG CCGGTATCGA CCAGGCGTTG TGGGACATCA AGGGCAAGGC GCTGGGCGTG CCGGTATACG AGTTGCTGGG CGGGCTGGTG CGCGACCGCA TGAAGACCTA TCGCTGGGTC GGCGGCGACC GCCCGGGCGC GATCATCCAG CAGATCACCG ACTACCGCGC GCTGGGTTTC GACACCTTCA AGTTCAACGG CACCGAAGAA ATGAAGCTGA TCGACAGCGC GCGCGCGGTC GACGCTGCGG TGGTCAAGGT GGCCGAAATC CGCGAAGCCT TCGGCAACAC CATCGACTTC GGCATCGACT TCCACGGCCG CGTCGGCGCG CCGATGGCCA AGGCGTTGCT GCGCGAACTC GAGCCGTTCA AGCCGCTGTT CGTCGAAGAG CCGGTGCTGG CCGAACAGGC CGAGTACTAC CCGCGCCTGG CCGCCAGCAC CTCCATTCCG CTGGCCGCCG GCGAGCGCAT GTTCTCGCGT TTCGAATTCA AGAACGTGCT GTGTGCCGGC GGCATCGGCA TGGTGCAGCC GGACCTGTCG CATGCCGGCG GCATCACCGA ATGCGTCAAG ATCGCCGCGA TCGCCGAAGC CTACGATGTC GGCTTCGCGC CGCACTGCCC GCTCGGCCCG ATCGCGCTGG CTGCATGCCT GCACGTGGAC TTCGTCTCGC ACAATGCGGT GCTGCAGGAA CAGAGCATCG GCATTCATTA CAACGAAGGC GCCGACCTGC TCGATTACGT CATCAACAAA GACGATTTTC ACTGCGTGGA TGGCAGCATT GCCGCCCTGC CCAAACCCGG GCTCGGTGTG GAGATCGACG AAGACATGCT CAAGCGCGCA AACGAAAACC CGCCCGACTG GCGCAACCCG GTGTGGCGCC ACAGCGATGG CAGCATCGCC GAATGGTGA
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Protein sequence | MKITRLTTYH AAPRWLFLKV ETDEGITGWG EPVIEGRARS VEAAVHELAG YVVGKDPARI NDLWQTMYRA GFYRGGAILM SAIAGIDQAL WDIKGKALGV PVYELLGGLV RDRMKTYRWV GGDRPGAIIQ QITDYRALGF DTFKFNGTEE MKLIDSARAV DAAVVKVAEI REAFGNTIDF GIDFHGRVGA PMAKALLREL EPFKPLFVEE PVLAEQAEYY PRLAASTSIP LAAGERMFSR FEFKNVLCAG GIGMVQPDLS HAGGITECVK IAAIAEAYDV GFAPHCPLGP IALAACLHVD FVSHNAVLQE QSIGIHYNEG ADLLDYVINK DDFHCVDGSI AALPKPGLGV EIDEDMLKRA NENPPDWRNP VWRHSDGSIA EW
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