Gene PXO_00121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_00121 
Symbol 
ID6305237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp1745065 
End bp1746213 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content65% 
IMG OID642639008 
Productgalactonate dehydratase 
Protein accessionYP_001912881 
Protein GI188575952 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.220191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCA CCCGCCTCAC CACCTACCAC GCTGCGCCGC GCTGGTTGTT CCTCAAGGTC 
GAAACCGACG AGGGCATTAC CGGTTGGGGA GAGCCGGTTA TCGAAGGCCG CGCCCGTTCG
GTGGAGGCCG CCGTACACGA ACTGGCCGGC TATGTCGTCG GCAAGGATCC GGCGCGCATC
AACGACCTGT GGCAGACCAT GTACCGCGCC GGTTTCTACC GTGGCGGCGC CATCCTGATG
AGCGCGATCG CCGGTATCGA CCAGGCGTTG TGGGACATCA AGGGCAAGGC GCTGGGCGTG
CCGGTATACG AGTTGCTGGG CGGGCTGGTG CGCGACCGCA TGAAGACCTA TCGCTGGGTC
GGCGGCGACC GCCCGGGCGC GATCATCCAG CAGATCACCG ACTACCGCGC GCTGGGTTTC
GACACCTTCA AGTTCAACGG CACCGAAGAA ATGAAGCTGA TCGACAGCGC GCGCGCGGTC
GACGCTGCGG TGGTCAAGGT GGCCGAAATC CGCGAAGCCT TCGGCAACAC CATCGACTTC
GGCATCGACT TCCACGGCCG CGTCGGCGCG CCGATGGCCA AGGCGTTGCT GCGCGAACTC
GAGCCGTTCA AGCCGCTGTT CGTCGAAGAG CCGGTGCTGG CCGAACAGGC CGAGTACTAC
CCGCGCCTGG CCGCCAGCAC CTCCATTCCG CTGGCCGCCG GCGAGCGCAT GTTCTCGCGT
TTCGAATTCA AGAACGTGCT GTGTGCCGGC GGCATCGGCA TGGTGCAGCC GGACCTGTCG
CATGCCGGCG GCATCACCGA ATGCGTCAAG ATCGCCGCGA TCGCCGAAGC CTACGATGTC
GGCTTCGCGC CGCACTGCCC GCTCGGCCCG ATCGCGCTGG CTGCATGCCT GCACGTGGAC
TTCGTCTCGC ACAATGCGGT GCTGCAGGAA CAGAGCATCG GCATTCATTA CAACGAAGGC
GCCGACCTGC TCGATTACGT CATCAACAAA GACGATTTTC ACTGCGTGGA TGGCAGCATT
GCCGCCCTGC CCAAACCCGG GCTCGGTGTG GAGATCGACG AAGACATGCT CAAGCGCGCA
AACGAAAACC CGCCCGACTG GCGCAACCCG GTGTGGCGCC ACAGCGATGG CAGCATCGCC
GAATGGTGA
 
Protein sequence
MKITRLTTYH AAPRWLFLKV ETDEGITGWG EPVIEGRARS VEAAVHELAG YVVGKDPARI 
NDLWQTMYRA GFYRGGAILM SAIAGIDQAL WDIKGKALGV PVYELLGGLV RDRMKTYRWV
GGDRPGAIIQ QITDYRALGF DTFKFNGTEE MKLIDSARAV DAAVVKVAEI REAFGNTIDF
GIDFHGRVGA PMAKALLREL EPFKPLFVEE PVLAEQAEYY PRLAASTSIP LAAGERMFSR
FEFKNVLCAG GIGMVQPDLS HAGGITECVK IAAIAEAYDV GFAPHCPLGP IALAACLHVD
FVSHNAVLQE QSIGIHYNEG ADLLDYVINK DDFHCVDGSI AALPKPGLGV EIDEDMLKRA
NENPPDWRNP VWRHSDGSIA EW