Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00112 |
Symbol | xylB |
ID | 6305244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 1753149 |
End bp | 1754642 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642639015 |
Product | xylulokinase |
Protein accession | YP_001912888 |
Protein GI | 188575959 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
TIGRFAM ID | [TIGR01312] D-xylulose kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.757855 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTTGT ACGTAGGACT GGATGTAGGC ACGCAGAGCG TCAAGCTGGT GGCCTACGAT CCGCAGGATC GCGCGGTGGT CGCCACCATC GCAGCGCCTA TGGAGCTGAT CAGCCGCGAC GACGGCACCC GCGAGCAACA GGCGCAGTGG TGGATCGACG GCATCGTGCA TTGCTTCGCG CAGCTCGAAG GCGGGTTGCG TGCACGCGTG CGCGGCATCT CCGTGTCGGG TCAGCAACAC GGCTTTGTGC CGGTGGCAGC CGACGGCAGC GTCACCGCGC CGGTCAAGCT GTGGTGCGAT ACCAGCACTG CGCTGGAATG CGACGAAATC ATGGATGCCG TTGGCGGCGC GGCCGGCAGC GTTGCGGCTG CAGGCAACCC CATCATGGCC GGCTACACCG CCTCCAAATT GCCGTGGACG CGCAAGCATC GCCCCGACGC GTATGCAGCG ATGACCACGG TGATGCTGCC GCACGACTAC ATCAACTTCT GGCTGACCGG CGCGCGCTTT GCCGAAGTCG GCGATGCCTC CGGTACCGGC TGGCTGGACG TGCGCACGCG GCAGTGGTCC GAGCGCATGT TGCGTGCGGT CGACGCGCAA CGCGACCTGC GCGATGCATT ACCGCCGCTG GTGGAAACCG GCGCGGTCTA TACGTTGTCC GATGCCGCTG CCCAGGCATT GAATTTGCCG GCCGGCGTGC GCGTCACCAC CGGCGGTGGC GACAACATGA TGGCCGCCAT CGGCACCGGC AATGTGGTAC CCGGGCGTCT GACCATGAGC CTTGGCACCT CCGGCACCTT GTTCGCTTAC GCCGATCATC CGGTGGTGGA CGATCAGGCA CGCTGGGCCG CGTTCTGCTC CTCCAGCGGC GGCTGGTTGC CGTTGATCTG CACGATGAAC TGCACGGTCG CCACCGAGGC GGTGATGCAC ATGTTCTCCA TCACCCGCGC GCAGACCGAG GCAATGATCG CCGACACCGC ACCAGGTGCG GACGGATTGG TATTGCTGCC GTTCTTCAAC GGCGAGCGCA CCCCGGATTT GCCGGCCGCG CGTGGCTGCC TGTTCGGCAT GGATTTGCAC AACACCACCG CCGCGCATTT TTATCGCGCC GCGATGGAAG GCGCTACCTA CAGCCTGCGC AACGGCTTCG ATGCCTTTGT TGCTGCGGGT TTGCAGTTCG ATACCATCCT GCTCACCGGT GGCGGCAGCA AGAGCGCGCA GTGGCGGCAG ATGGTGGCCG ACATCTTCAA CCTGCAGGTC GTGGTGCCAA CCCAGCCCGA AGGTGCTGCG TTCGGTGCGG CACTGCAGGC ATTGTGGGCT TGCGAGCGCG CCGATGGTGG CGATGCGGCG TTGGCGGATG TGGTGCTGGA GCACCTGCAG GTGGACGACG CGCTTGCCGC ACAGCCCAAC CCGCAGCGTG TGGCCCAGTA TCAGCAGCAC TATCAGACCT TCCTCAAGCA CCTGCATGTC GTCAGCCCGC TCTACGCTAG CTGA
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Protein sequence | MSLYVGLDVG TQSVKLVAYD PQDRAVVATI AAPMELISRD DGTREQQAQW WIDGIVHCFA QLEGGLRARV RGISVSGQQH GFVPVAADGS VTAPVKLWCD TSTALECDEI MDAVGGAAGS VAAAGNPIMA GYTASKLPWT RKHRPDAYAA MTTVMLPHDY INFWLTGARF AEVGDASGTG WLDVRTRQWS ERMLRAVDAQ RDLRDALPPL VETGAVYTLS DAAAQALNLP AGVRVTTGGG DNMMAAIGTG NVVPGRLTMS LGTSGTLFAY ADHPVVDDQA RWAAFCSSSG GWLPLICTMN CTVATEAVMH MFSITRAQTE AMIADTAPGA DGLVLLPFFN GERTPDLPAA RGCLFGMDLH NTTAAHFYRA AMEGATYSLR NGFDAFVAAG LQFDTILLTG GGSKSAQWRQ MVADIFNLQV VVPTQPEGAA FGAALQALWA CERADGGDAA LADVVLEHLQ VDDALAAQPN PQRVAQYQQH YQTFLKHLHV VSPLYAS
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