Gene PXO_00090 details

Gene Information

• Locus tag: PXO_00090
• Symbol: dapB
• ID: 6305265
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 1770057
• End bp: 1770725
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 642639036
• Product: dihydrodipicolinate reductase
• Protein accession: YP_001912909
• Protein GI: 188575980
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0289] Dihydrodipicolinate reductase
• TIGRFAM ID: [TIGR00036] dihydrodipicolinate reductase

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.266189
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCAAGG CGTTGCTGCG ATTGGCTGCC GAAGATGAGA GCTTGCAGGT GGTCGGTGCG 
GTGGTGGGTC GCTCGCCATC GCAACGCGTG ATCGACGGCG TGCCGTTTTT TGCCGCCAGC 
GAGCTCGGCG GCGCGCCTGC GTTCGATGTG GCCATCGACT TCAGCTTGCC GCAGGGCTTC 
GCACCGATCC TGGCGCTGTG TGCGCAGCGC GGTAAGCCGC TGGTGTCCGG CACCACCGGG 
CTGGACGAAG CGCAGCGCGT GGCACTGCGC GATGCGGCCC AACAGATTCC ATGGGTATGG 
GCATCCAATT TCAGTCTGGG CGTGGCAGTG CTCACCGAGT TGGTGGAGCG CGCCGCCGGC 
ACCTTGCCGG GCTGGGATTG CGACATCATC GAAGCGCATC ACGTGCACAA GCAGGATGCG 
CCGTCCGGAA CCGCATTGAC CCTGGGCGAG GCCGCGACCG TTAGCGGCGC GCAGCCGCGC 
TATGTCAGCC TGCGTGCCGG CGACATCATC GGCGAACACA CCGTGCAGTT CACCGGGTTG 
GGCGAGCGGG TCGAACTGGT GCATCGCGCC ACCAACCGCG ACATCTTCGC GCGCGGTGCC 
CTGCATGCCG CCAAGCGACT GATCGGCAAG CCGGCCGGCA GCTACCGCGT GCGCGATCTG 
CTGCTGTAA 

 

Protein sequence

MGKALLRLAA EDESLQVVGA VVGRSPSQRV IDGVPFFAAS ELGGAPAFDV AIDFSLPQGF 
APILALCAQR GKPLVSGTTG LDEAQRVALR DAAQQIPWVW ASNFSLGVAV LTELVERAAG 
TLPGWDCDII EAHHVHKQDA PSGTALTLGE AATVSGAQPR YVSLRAGDII GEHTVQFTGL 
GERVELVHRA TNRDIFARGA LHAAKRLIGK PAGSYRVRDL LL