Gene PXO_00085 details

Gene Information

• Locus tag: PXO_00085
• Symbol: greA
• ID: 6305270
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 1775792
• End bp: 1776256
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642639041
• Product: transcription elongation factor GreA
• Protein accession: YP_001912914
• Protein GI: 188575985
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01462] transcription elongation factor GreA

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 0.428672
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACATCGA AGGGCGCGCT GCGCCTGCGC GAAGAGCTGG AGCAACTGAA GTCGGTCAAG 
CGCCCGGAGG TGATCAATGC GATCGCCGAA GCGCGTGCGC ACGGCGACCT GAAGGAAAAC 
GCCGAGTATC ACGCCGCGCG CGAGCAGCAG AGCTTCATCG AAGGCCGCAT CAAGCAGCTG 
GAAGGCGAGC TCTCGCATGC CGAGATCATC GACATCACCA AGCTGTCGGC CGGTAACAAG 
ATCGTGTTCG GCGCCACGGT GACGCTGGCC GATACCGAGA CCGACGAAGA GAAGCGCTAC 
CAGATCGTTG GCGACCTGGA AGCGGACATC AAGATGGGCC TGATCGCGAT TTCCTCGCCG 
CTGGCGCGTG CGCTGATCGG CAAGCTGGAA GGCGATTCGG TCACCATCGA TGCGCCGGCC 
GGCCAGCGCG AGTACGAAGT CGTCAGCGTC GCCTACCTGG ACTGA 

 

Protein sequence

MTSKGALRLR EELEQLKSVK RPEVINAIAE ARAHGDLKEN AEYHAAREQQ SFIEGRIKQL 
EGELSHAEII DITKLSAGNK IVFGATVTLA DTETDEEKRY QIVGDLEADI KMGLIAISSP 
LARALIGKLE GDSVTIDAPA GQREYEVVSV AYLD