| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00067 |
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| Symbol | rpfB |
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| ID | 6305283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 1794559 |
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| End bp | 1796241 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642639054 |
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| Product | putative long-chain fatty acyl CoA ligase |
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| Protein accession | YP_001912927 |
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| Protein GI | 188575998 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAGG CACGTCCTTG GTTGCAAAGT TATCCAGCCG GCGTTGCCGC CGACATCGAT
CTTGAGCAAT TCCGCACGGT GGCCGAGGTG TTCGCCACGT CGGTAAAACG CTTTGCCGAC
AGGCCTGCGT ATCACAGCTT CGGCAAGACC ATCACCTACC GCGAAGCGGA TCAGCTGGTC
GAGCAATTCG CTGCTTACCT GCTTGGCGAA CTGCAGTTGA AGAAGGGCGA CCGCGTCGCC
TTGATGATGC CCAATTGCCT GCAGTATCCA ATCGCAACCT TCGGCGTCCT GCGTGCCGGC
CTGACCGTGG TCAACGTCAA TCCGCTGTAT ACCCCGCGCG AACTCAAGCA TCAGTTGATC
GACTCCGGCG CAAGCGTGCT GGTGGTCATC GACAATTTCG GTACCAACGT GCAGCAGGTC
ATTGCCGACA CGCCCGTCAA GCAAGTCATC ACCACCGGTC TGGGCGACAT GCTGGGCTTT
CCGAAGGCGG CGGTGGTCAA CTTCGTCGTC AATTACGTCA AGAAGTTGGT GCCGGACTAC
CGCATCAACG GTGCGATCCG CTTCCGCGAG GCGCTGGCGC AGGGCCGCAA GCACAGCATG
CCGACGCTGC AGATCGAGCC CGACGACATC GCGTTCCTGC AGTACACCGG CGGCACCACC
GGCGTGGCCA AGGGCGCGAT GCTGACTCAC CGCAATCTGG TCGCCAATAT GCAGCAGGCG
CACCAGTGGG TCGGTGGCAC CGGCCAGCTG TTGGAAGGCC AGGAAGTGGT CATCACTGCG
CTGCCGCTGT ACCACATCTT CGCATTGACG GCCAATGGCC TGGTCTTCAT GAAGGTTGGC
GGCTGCAATC ACCTGATCAG CAACCCGCGC GACATGCCCG GCTTCGTCAA GGAGCTGAAA
AAGACCCGCT TCACCGCGTT CACTGGCGTC AACACGCTGT TCAACGGCCT GCTCAATACA
CCCGGTTTCG ATCAGATCGA TTTTTCCTCA CTCAAGATGA CCCTGGGCGG CGGCATGGCC
GTGCAGCGCT CGGTCGCCGA ACGCTGGAAG AAGGTCACCG GCCTGACCCT GGTCGAGGCG
TACGGCCTGA CCGAAACCTC ACCGGCCGCC TGCATCAACC CGATGACCCT AAAGGACTAC
AACGGCTCGA TCGGCCTGCC GATTCCGTCC ACCGATGCCT GCATCAAGGA CGACGCCGGC
ACGGCGTTGG CGATCGGCGA GATCGGCGAG TTGTGCATCA AGGGCCCGCA GGTGATGAAG
GGCTATTGGA AGAAGGCCGA CGAGACCGCC AAGGTGATGG ATGCCGAAGG CTGGCTGCAC
ACTGGCGACA TCGCCCGCAT GGACGAGCAA GGCTTCGTCT ACATCGTCGA TCGCAAAAAG
GACATGATTC TGGTGTCCGG CTTCAACGTC TATCCGAACG AGATCGAAGA CGTGATCGCC
ACCATGCCCG GCGTGCTGGA AGTGGCAGCG GTCGGCATGC CGGACGAAAA GTCCGGCGAG
ATCGTCAAGG CGGTCATCGT GAAGAAGGAC CCTGCCCTGA CCGCCGACGA TGTGAAGGCG
CATTGCCGCG CCAACCTCAC CGGCTACAAG CAGCCGCGCG TGATCGAATT TCGGAAGGAA
TTGCCCAAGA CCAATGTGGG CAAGATCCTG CGCCGTGAAT TGCGGGACGC GCCGAAAACG
TAA
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| Protein sequence | MNQARPWLQS YPAGVAADID LEQFRTVAEV FATSVKRFAD RPAYHSFGKT ITYREADQLV
EQFAAYLLGE LQLKKGDRVA LMMPNCLQYP IATFGVLRAG LTVVNVNPLY TPRELKHQLI
DSGASVLVVI DNFGTNVQQV IADTPVKQVI TTGLGDMLGF PKAAVVNFVV NYVKKLVPDY
RINGAIRFRE ALAQGRKHSM PTLQIEPDDI AFLQYTGGTT GVAKGAMLTH RNLVANMQQA
HQWVGGTGQL LEGQEVVITA LPLYHIFALT ANGLVFMKVG GCNHLISNPR DMPGFVKELK
KTRFTAFTGV NTLFNGLLNT PGFDQIDFSS LKMTLGGGMA VQRSVAERWK KVTGLTLVEA
YGLTETSPAA CINPMTLKDY NGSIGLPIPS TDACIKDDAG TALAIGEIGE LCIKGPQVMK
GYWKKADETA KVMDAEGWLH TGDIARMDEQ GFVYIVDRKK DMILVSGFNV YPNEIEDVIA
TMPGVLEVAA VGMPDEKSGE IVKAVIVKKD PALTADDVKA HCRANLTGYK QPRVIEFRKE
LPKTNVGKIL RRELRDAPKT
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