| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00020 |
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| Symbol | |
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| ID | 6305330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 1848287 |
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| End bp | 1850092 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642639100 |
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| Product | TonB-dependent outer membrane Receptor |
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| Protein accession | YP_001912973 |
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| Protein GI | 188576044 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00000882452 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATCT CCAAGTTCGC ATCCAGCACG TTGCCTCGAC ACGGCATGCT GCTGTTGTCC
ATCAGCGGAT TCTGCGCGCC AGCGGCGAAC GCACAGACCA GTGAACAGCG CACCGATGCC
GAGGCCACGA CGCTGGACAC ACTGAAGGTG CAAGGACAGC GCCAACGACG GCTGGAGTCA
CCTGAGGCCG TCGGTAGCCG CCTGGGACTG ACCCAGCGCG AGACGCCTGC ATCCCTGCAG
GTCATTGACC ACACTGACAT CGCCACCCAG GGAGCACGCA CCACCAGCGA GGTGTTCGAC
ATGGTTGCCG GCACCATGGT CGGCAATGTG CCGGGCAACC CCGCCGTGGT CACCATGCGT
GGGTTCAGCG GTAACACGAT CTCGGTCTTG CACGACGGCG TGCGGCTGGG TGCATCGACG
ATCGTCACCC GCAATCTGGA CACCGTCGGT CTGGAGCGGG TCGAAGTACT GCGCGGCCCG
GCGTCCGTGC TTTATGGCGA AGGCGCCCTG GGCGGGGCCA CCGGGGCCAA CAGCGACTTG
CTGCGCTGGC GTGTGGATCT TCCGCTCGGC AACCACTGGT CGTTGCAGAA CGATCTCAGC
TGGTATCAGG CCGATCGGGA CTTCTTCTAC TCCGACAAGT GGATCTACAC CCCCGCGACG
GGGCAATTGT CCAGAACCGC TGAGCGGATC CAGCACGACC AGCGGTTCTG GAACGAACGC
CTCGCGCTGT CGTTCGACGG CCGGCTCGGC GGGCATCGCA ACCGCTTCAC CGCCGGAATG
GAGCACAACG ACACCAAGTT CCACACCCCG CGACAAACCG GGGTGACCAC GCCGGTCTCG
CCGCTCGATC CGGTACTTGG CGTCTTCCCG GATGGATCGG CCGCCAACTT TCCGGGGGCG
GGCAACAACG TGATCTTCGA CTCCCGCCTG CGCACCTTGG CCGTGTTCGC CGAGAACGCG
CTCAACCTGA CCGCCCGGTG GAGCCTGCTC GCAGGCGCGC GCGTTGAGAA GATTCAACTT
TCGCGTGATA TCCGCGATGT GAACACCGGC AACGTGGCGT CGTTCCGTCC CGACTACCGC
CCCTTCTCCT GGCGTGTGGG CACGGTGTTC GACCTGACCC CGGAGGTGCA GCTGTATGGG
CACTACGCCA CTGCGGTGAG TCCGGTCTCC ACCCTGCTGA CCATGCGACC GGCCGCCGGC
GTGTTCGATC TCAGCAAGGG GAAATCGCTT GAGGCGGGCA TCAAGGCAAA CGCATGGGGC
AAGCGTATCG AGTGGACAGC AGCGGCTTAC AGAATCGAGC GGGACAACAT TCTGACCCGC
GACCCTGCCA ACCCAAGCAT CAGCGTCCAG GGCGGCGCGC AGTCCTCCCA AGGCGTGGAG
CTGTCCGCAC AGGCGCAGCT CACCCGGGGC TTGCGACTGG ATCTGGCGGC CGCTTACGGC
ACAGCGCGCT ATGACCGGCT GCTGGAGGCC GGTGGCGCCG ACCGCAGCGG CAAGCGTCCT
CCCAATGTTC CCGACGGCAG CGCAACCCTG GCGGCCAGCT ACCGCTTCCT GCGCGTGCCG
CTCTCGCTCG GGGCATCCAG CCGCAACGTT GGCGGCTTCT CTACCGACAA CGCCAACACC
ATCCATGTCG CTGGCCACAC GACCTTCGAT GCATGGCTCG GCTACGACTG GCAGCGCGTC
TCGGCCGTGC TGCGTGTGCG CAACCTCAGC GACGCGCTGT ACGGCACGTA TTCCGGTTAT
CCGTCCACCC ACATCTACCT CGGTGCTCCC CGCAGCATCG AGCTGACCTT GCGGACGCGG
TTCTGA
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| Protein sequence | MTISKFASST LPRHGMLLLS ISGFCAPAAN AQTSEQRTDA EATTLDTLKV QGQRQRRLES
PEAVGSRLGL TQRETPASLQ VIDHTDIATQ GARTTSEVFD MVAGTMVGNV PGNPAVVTMR
GFSGNTISVL HDGVRLGAST IVTRNLDTVG LERVEVLRGP ASVLYGEGAL GGATGANSDL
LRWRVDLPLG NHWSLQNDLS WYQADRDFFY SDKWIYTPAT GQLSRTAERI QHDQRFWNER
LALSFDGRLG GHRNRFTAGM EHNDTKFHTP RQTGVTTPVS PLDPVLGVFP DGSAANFPGA
GNNVIFDSRL RTLAVFAENA LNLTARWSLL AGARVEKIQL SRDIRDVNTG NVASFRPDYR
PFSWRVGTVF DLTPEVQLYG HYATAVSPVS TLLTMRPAAG VFDLSKGKSL EAGIKANAWG
KRIEWTAAAY RIERDNILTR DPANPSISVQ GGAQSSQGVE LSAQAQLTRG LRLDLAAAYG
TARYDRLLEA GGADRSGKRP PNVPDGSATL AASYRFLRVP LSLGASSRNV GGFSTDNANT
IHVAGHTTFD AWLGYDWQRV SAVLRVRNLS DALYGTYSGY PSTHIYLGAP RSIELTLRTR
F
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