| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00017 |
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| Symbol | |
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| ID | 6305332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1851780 |
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| End bp | 1854890 |
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| Gene Length | 3111 bp |
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| Protein Length | 1036 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642639102 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001912975 |
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| Protein GI | 188576046 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000276656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGAAA TGAACTGCAT GCCATTCGCA CGCAACCGCA GCACGCTGTC CGCCGGTATC
GCCATCGCCT TGTTCGCGAG CGCGGCTTCC AGCGCCGCCG TCGCCCAGCA GGCCGACGGC
ACGCCGGCGC CCGCGGGCCA GGCCGCGTTG CAGGCCACGG ATCTGGACGC GGTGACGGTG
ACCGGCTACC GCTACGCGAT CGAAAAAAGT CTGGAGCACA AGCGCAACGC CAACGCCGTG
GTCGATGTGA TCACCGCCGA GGACGTGGGC AAATTCCCCG ACAAGAACGT GGCCGATGCG
CTGCAGCGCG TGCCCGGCGT GGTCATCAGC CGCGACGGCG GCGAAGGCAA GAACGTCAGT
GTGCGCGGCC TGTCCTCGGA GCTGGTGCTG ACCGAATTGA ACGGCAACTA CATCGCCACC
GCCGAATCCA ACGGCGACCC GACGCGCTCG TTCAACTACA CGCTGCTGCC GTCGAACCTG
CTGGGCAGCG CGGAACTGTA CAAGACCCCG GAAGCACGCA TCGACGAAGG CGGCATCGGC
GGCACGGTGA TCCTGCAGAC GCGGCGCCCG CTGGAACTGG AGCCACATTC CGGCTTTGTC
TCGGCAGAGG GCACCTGGTC GGATACCAGC AAGAAGACCG ACGGCCAGTT CTCCGGTTCG
TACTCATGGC ACGACCAGGA CAACCGCTTC GGTGTCTTCG TGGGTTACAC GCAGCAGAAG
CGCACCGCGC GCACGCTCAA TGCCAGTACC GAAAGCTGGC AGTGGTACGG CCGCGACGAA
GTCGGCCCGG CGGTCGACGT CAACGGCAAT CGCTCGGACT TCAACGCCAA CTGGTGGGGC
GGGACCGGTT TCTGGGACCA GAACGGCAAT TACGCCACCG GTTTCATGAT GCCGACGGCG
GTCAGCCTGG GCGTCAAACG CGAGGAGCGC GCGCGCAAGG GCGGGCAACT GACCTTGCAG
TTCAAGCCGA CCGACGACCT GACCCTGACC GCGAACTACG TCCGCTTCGA CCTGTCGCAG
AACTCGCAGA CCAACACCAT CAAGATTCCC GAGTGGAACA TCGCGCGCTA TGACGGCGAC
GGCAACTGGC GCGGCGGCCG CCTGCTCGAC AGGCTGCAGT TCGATCCCAG CGGCACGATC
GTCACTGGCG CCGCCTACAG CCTGCGTCCG GGCAAGACCT ATTATTGCAG CGAGGCGCAG
GCCGCCGCGG CCGGCCTGCC GCCGGGTGGC TGGGGCTCGG ACGACTGCAC CGTGCCGACC
CCGCAGATCA CCGGCAGCTA CAACATCGAA AAATCGCAGT CGCAGACAGT GGACCTGGGC
GGCGAATGGC GTGGCGAGCA GGTGGACGTG GCGTTCAAGG CCGGCCGCAC CTGGGCCAAG
GGCGGGCCGG AGCTGCAGTT CTCGCTGCCG ATCAAGCCGC GCCGCCAGAA CGCCGACGGC
AGCTGGAGCA ACGGCAACCT CGCCAGCGCC TGGGACCTGA CCGGCACGCC GACCATGACG
TTCTCGCCGG AGCTGATGCA GAACCTGCGC GACGGCATCC TGCAGGTCGA CCTGGGCTCG
ACCGGCTCGT CCTGGACCCG CAACACCAAT CAGCAGCAGT ACGCGCAGAT CGATACCACG
TGGCATATCG ATGGCAACTT CTTCGACTCG CTGCAGTTCG GCCTCAAGCG TCGCGACGGC
GGCATCCACC GCAATACCGG CAACAACTAC TGGGTGTGCC CGGGCACCGA CCCAAGCGAC
TACGACAACC GCTACTGGAA CGGGCGCTGC AATGCCATCG CCACGCAGTT TTCGCCGGGC
CTGCTGTTCG CGCAGGACAA CCTGGCCGGT GGCGTCAACG CCAGCGCGTT CCCGGCGATC
AACTTCCCGG GCTACATCGG CTACTTGAAC CAAACCTACG GCGCGATGCA GACCCGCAGC
GAAGACAACT TCGTCTACAA CGTCGACGAG GAGATCTATT CCACCTACCT GCAACTGAAC
TTCCACACCG AGCGGCTGCG TGGCAACGTC GGCGTGCGGG TGGCACGCAC CGGCCAGCGC
GCCGATTCCA CCGACAAGGT GACCGCCTAC AACGACTACT TCTTCGACGG CACCGACGGC
AATCCGCTGG CCTGCCAGCA GGGCGCCGCC ACGCCCAGCG GCGCCCCGGC CGACACCTAT
TGCGGGACCG AAGGCTATTG GCGTTTGTCC GATAGCGTGC AACGCACCGA GTCGTTCGTG
GTCAGTGGGC TGGACCGCGA TTACACCGAC GTGCTGCCGA GTTTCAACCT GGCCTACGAC
CTGACCGAGA ACCTGTTGCT GCGCGCGGCA GCCGCGAAAG TGATCGCACG CCCCAGCTAC
AACGACATCG CCGCGCCTGG CAGCCTGGAG TTCTACAGCC CCGAGTACGT GGCCGACCGG
CGCCTGACCG GCGGTTCCAG CGAGCAGGGC TGGTACGGCT CGGGCAGCAA CAAGACCCTG
GAGCCGTACA AGGCCACCCA GTTCGACCTG GGGCTGGAAT GGTATTTCCA CCCGGGGTCG
GTGGCGGGTG TGGGACTGTT CCGCAAGAAC GTGGAGAACT TTGCGGTCGA CGTGATCAGC
GACGTCAACA TGATGATCGA CGGGCAACAG GTCACCGTGC AGAACTACAG CAGCCAGGCC
GGCGGCCAGG ACGCGGTCTC GCAGGGTGTG GAGCTCTACG CGCAGCACAC GCTGCCGTTC
GGCCTCGGGG TGCAGTTCAA CTACACCTAC AACGATGCCA GCAAGGCGGC GGTGCGGCTG
GAAGACGGCA CCGAGGCCGG CAAGACCTCC ATGCCGGGCA GCGCCAGGAA CCAGACCAAC
CTCACCGTGT TCTACGAGAC CGACCGCCTG CTGCTGCGCG CCTCGTACAA CCGCCGCGGG
GAACTCGTGC AAGGGCTGGT CAAAGGGTTG AACGTCTACG AGGAGCCGTA CTACCAGGTC
GATCTGAACG CGGCGTACAA CATCACCCCG GCCCTCAGCC TCACCGCCTC GGTACTGAAC
CTGACCAAGC AGGAGTCCCG CTCGCACCTG GGCGACGACA CACGCGCCCG CTTCTATACC
GGCGGCTACG CGGGCCGGCT GGCGTACCTG GGGCTGACTT ACAAGTTCTA G
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| Protein sequence | MIEMNCMPFA RNRSTLSAGI AIALFASAAS SAAVAQQADG TPAPAGQAAL QATDLDAVTV
TGYRYAIEKS LEHKRNANAV VDVITAEDVG KFPDKNVADA LQRVPGVVIS RDGGEGKNVS
VRGLSSELVL TELNGNYIAT AESNGDPTRS FNYTLLPSNL LGSAELYKTP EARIDEGGIG
GTVILQTRRP LELEPHSGFV SAEGTWSDTS KKTDGQFSGS YSWHDQDNRF GVFVGYTQQK
RTARTLNAST ESWQWYGRDE VGPAVDVNGN RSDFNANWWG GTGFWDQNGN YATGFMMPTA
VSLGVKREER ARKGGQLTLQ FKPTDDLTLT ANYVRFDLSQ NSQTNTIKIP EWNIARYDGD
GNWRGGRLLD RLQFDPSGTI VTGAAYSLRP GKTYYCSEAQ AAAAGLPPGG WGSDDCTVPT
PQITGSYNIE KSQSQTVDLG GEWRGEQVDV AFKAGRTWAK GGPELQFSLP IKPRRQNADG
SWSNGNLASA WDLTGTPTMT FSPELMQNLR DGILQVDLGS TGSSWTRNTN QQQYAQIDTT
WHIDGNFFDS LQFGLKRRDG GIHRNTGNNY WVCPGTDPSD YDNRYWNGRC NAIATQFSPG
LLFAQDNLAG GVNASAFPAI NFPGYIGYLN QTYGAMQTRS EDNFVYNVDE EIYSTYLQLN
FHTERLRGNV GVRVARTGQR ADSTDKVTAY NDYFFDGTDG NPLACQQGAA TPSGAPADTY
CGTEGYWRLS DSVQRTESFV VSGLDRDYTD VLPSFNLAYD LTENLLLRAA AAKVIARPSY
NDIAAPGSLE FYSPEYVADR RLTGGSSEQG WYGSGSNKTL EPYKATQFDL GLEWYFHPGS
VAGVGLFRKN VENFAVDVIS DVNMMIDGQQ VTVQNYSSQA GGQDAVSQGV ELYAQHTLPF
GLGVQFNYTY NDASKAAVRL EDGTEAGKTS MPGSARNQTN LTVFYETDRL LLRASYNRRG
ELVQGLVKGL NVYEEPYYQV DLNAAYNITP ALSLTASVLN LTKQESRSHL GDDTRARFYT
GGYAGRLAYL GLTYKF
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