| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00004 |
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| Symbol | |
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| ID | 6305061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1548734 |
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| End bp | 1550980 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642638834 |
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| Product | Rhs element Vgr protein, putative |
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| Protein accession | YP_001912710 |
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| Protein GI | 188575781 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCATGCAG AAATGATACC GACCGGTTTT GAAACGCTGA TGCGACTGGC ACAGGATCGC
CGCCTGATCC GCGTCAAGAC CGTGCTCGAA GAAGAAACGT TTGTCGTCAA GCACTTTACC
GGCGTGGAAG AAGTTTCTGC ACCGTATACC TTTGACATCG AACTGCTTTC CGCACAGGCC
GGATTGCAGC TGAAGCAACT CATCGGTCAG CCGCTGCGAT TGAGCCTGGG CGACGAGTTT
GACGGGCGCG TCGTGCACGG CTACGTACGT GAGTTTGCCC AGGTCGGTAA GCAGGGCGAG
CTGAGTGCCT ATCGCTGCGA GCTCGCGCCC TGGTTCGCGT TTCTCCAATA CACCAGCAAT
TGCAGGATTT TCCAGGATCT GAATGTGCTC GATATCATCG AGCGGGTGTT CGATGGCTAT
CCGCAACTTG CAGACTATGC GCACGATCTC GACGCGGCAC GATATCCGAA GTTGAGCTAT
TGCGTGCAGT ACAACGAGTC GGATTTCCAG TTTGTCTCGC GCTTGCTGGA GGATGCGGGC
ATTTACTACG CGTTTCGTCA CTCCGATGAT GCGCACACCA TGGTCTTGTC CGACGACTCG
ACCAGTTCGG AGCAGTTCGG CGAGCCCGCC AGTATCGAGT TCGTGTCAGA CCAGGGCACG
CTACAGCGGC CTGGCGTGCA TCGCTGGGCC GCCAGACGTC GGGTGGGACC CACGGCGCAT
GCCCTCAAGA GTTTCGACTT CAAGCAGCCG CGGACTGCAC TGGCAGCCAG CAATGGCCGT
GAAGTTCCGG TTGGTGCACT TCCGCAGCTG GAGCGTTATC ACTACGACGG CGCTGCGCGA
TTTGCAGACA GTCGCGTGGG CGATGCGCTG GCCGGCTTGC GTGGCGAAGA AGCCGCGTGG
CCAACCAAGT TGTTCGAGGG GGAAGGCAAT AGCAGCCGAC TGGTCTGCGC GGGATGTTTC
CAACTGGAGC GGCATCCTGA TTTCATCGGA CGATCCGAAC AAGACAGGCA GTTCTTCGTG
GTGAAGCTGC AACGGGAGGG GCGCAACAAC TTCTCCAGCG ACATGCGCGA TGCGCAATCG
CCCAGCTATC AATGCACTGC AACCGTGTTG CGCCGGAAGA TTCCGTATCG TCCGTTGCGG
GTGACGCCAG TGCAACGGAT GCCCGGACCG CAGACGGCAA CTGTCGTCGG ACCGCCCGGC
GAGGAGTTGC ACGCCGACCG CTACGGTCGA GTCAAGGTAC AGTTTCACTG GGATCGTCAT
GGTGAGTTTC GCGAGAACAG TTCGTGCTGG ATCCGCAGTG CCAGCCCCTG GGCCGGTGCG
GATATGGGGG GCGTTTCGCC ACCGCGTGTC GGGCAGGAAG TGGTGGTGGA CTTCCTCGAT
GGCGATCCCG ATCGACCCAT CATCACCGGG CGTGTCTACA ACGAAGACAA TATGCCGCCG
TTCGGCATGG AAGTCAGCGG GCTCAAATCC AAGACGGTCA AGGGTGGCGG CTATAACGAG
CTCTCCATGC ACGATAGTGC CGGTGGAGAA CTCTTCAACA TGCGCGCGCA GCGCGACATG
GTGACCACGG TTCTCAACGA CCAGAACGCG TCGATCCAGA ACAACAAGTC CACCAGCGTG
GCGGTCAATC ACGCAATGAC GGTGGGCGCG AACCAGACCA TCGCAGTGGG TGCAAACCGC
GGCATCACCG TCACCGGTAC CGACACGCTG GGTGTTACCG GCACGCGTAC CACCAGCGTG
ACTGGTGCGG TGACCGAGAC CTTTCAGGCT GGCCAGACGA AGACCATTGC CGCGGCCGGG
TACAGAGAAA CGGTCACCGG TGATTTCGCC ACCACCTTGA ACGGCAACTT CGTCAGCCAG
CGCAACGGCA CCTGGAAGGA AACCGTCACC CAGACCTCGT TGCGGCAGGT GATCGGCAAG
ACCACCGAAC AGCTGAGCGC CGGACGGGAG GTAACCATCA CCGGCCTGGA CAAGCGAAGT
GTTCAGGGGG CTGTGGAGGA TGCCAATGTC GGTGCGCGCA CCGTCAGCGT TGACGGCAGC
ATGGAACAAG CGATATCCGG CACCCATACG CTGTTTTCCA ACGGAGACAT GACACTCGCC
TCGGGCAGCA AGCTGGTCGC GACCGTGGGC GGTGCCGCGA TCGAAATCCT GGGCGACAAG
ATCAGCATTT CCGCCGGTGG CTCCACCATC GTGATCGACG GCTCGGGCGT GTCCGTCAAC
GGGGCGGAAA TCAAGCTCAA TTGCTGA
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| Protein sequence | MHAEMIPTGF ETLMRLAQDR RLIRVKTVLE EETFVVKHFT GVEEVSAPYT FDIELLSAQA
GLQLKQLIGQ PLRLSLGDEF DGRVVHGYVR EFAQVGKQGE LSAYRCELAP WFAFLQYTSN
CRIFQDLNVL DIIERVFDGY PQLADYAHDL DAARYPKLSY CVQYNESDFQ FVSRLLEDAG
IYYAFRHSDD AHTMVLSDDS TSSEQFGEPA SIEFVSDQGT LQRPGVHRWA ARRRVGPTAH
ALKSFDFKQP RTALAASNGR EVPVGALPQL ERYHYDGAAR FADSRVGDAL AGLRGEEAAW
PTKLFEGEGN SSRLVCAGCF QLERHPDFIG RSEQDRQFFV VKLQREGRNN FSSDMRDAQS
PSYQCTATVL RRKIPYRPLR VTPVQRMPGP QTATVVGPPG EELHADRYGR VKVQFHWDRH
GEFRENSSCW IRSASPWAGA DMGGVSPPRV GQEVVVDFLD GDPDRPIITG RVYNEDNMPP
FGMEVSGLKS KTVKGGGYNE LSMHDSAGGE LFNMRAQRDM VTTVLNDQNA SIQNNKSTSV
AVNHAMTVGA NQTIAVGANR GITVTGTDTL GVTGTRTTSV TGAVTETFQA GQTKTIAAAG
YRETVTGDFA TTLNGNFVSQ RNGTWKETVT QTSLRQVIGK TTEQLSAGRE VTITGLDKRS
VQGAVEDANV GARTVSVDGS MEQAISGTHT LFSNGDMTLA SGSKLVATVG GAAIEILGDK
ISISAGGSTI VIDGSGVSVN GAEIKLNC
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