Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00003 |
Symbol | |
ID | 6305062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 1551004 |
End bp | 1552623 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642638835 |
Product | tetratricopeptide repeat domain protein |
Protein accession | YP_001912711 |
Protein GI | 188575782 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCAAGA ATCCGGTTGA ACAACGCATT GCGCTGTTGC GCGATGAGTG GATGCAGGCC AGCGACGACC CTGCGCTGCG GTTGTTTGTC TGGCGTGTGC CGGCCAACGC CTTGCGTCTG CTGGCAGCGT TTTTCGAGGC ACAGAAGCAT CCGGGCGATT GGAACGTGCC CGACTATTTC CTGCGCCTCG ATACTTCGTT CGACACCAGT TTCGGCTACA GCCGTGCGCT GAAGCTGGCA CTGTCGGCCA GCTACCTCGG CAGCCAGAGC GAGCTGCGCG AGCAAGGTGT CGATCTTGGC TGGCGTGTGC CCGGCCCGTC GCACGCCGAC ACCGCGGCGG GCGTGCAGGC GGTGTTCGAA TCGTTTGCCA CGCATCATGC GGCGTACCTG CGCTACCTGG CAGTGGTCCT TGAACCTGAG CGGGTGACGT CGCCAGAAGC GTTCATTGCC TGGGTCGATG CCGCGATGGC AGCGTCGACA TCACCCGCGC TGCGGCTGGT TCTGGTGGAC ACCTATGAAG ATCCGCGCTG GCAGCCATTA CTGGATCGGC ACGCCGCGCG CGCGCACCGT ATTGCGCCGC AGGTGGACAT GTTCGATATC GGGCGCGAAA TTGCAGCGCA GTCGGGCGGT GCGGGGCCAG CGGTGGCGTA TCGCCAGTTG TTGAGTGACC TCATGCTGGT GCTTGAGCGC GGCAGCGCTG CCCAGCTTGC CCAACGCATC GAGCGCCCGA TGGCATTGGC ACAGCGGCAT GGCTGGAGCG ATCACCAGGT GGTGTTGAGC ATGATGCTCG CTGGCGGCTG GTTGAAGGAG AAGCACTATC CTGCTGCCAT CAGCAGTTAT CGTCAGGCGC GCGATCACGC AACACAGGCC CTGACCGGCG GGCATCCGGC CGCGCGCGAT CTGTTGATGC AAGGCTGGTT CGGCGAGGCG GGGACGTGGT TTGCCGCAGG GCAGCCCGAC CGTGCGGTTC AGGGGTATCT GTCTGCCGCG CAGACCGCTG CCGAGATTCC CAACCCGATG TTCGTGATCG AGGCCTATCG CATGGCCGCG TTCTGTCTGG CGCAGGACGG CCAGCGCGAG GCGGCGCGCA ACTACGGGCT GGAGGCCGTG CGCGCTGCCA AACCGCTGCG AAGCGAGGAT CGCCGCTCCA CCACCTTGCC GCAAACCCTG CAGGACCTGC TTGTACTGCA AGACAAGCGG CGCGCACACA GGATCGAGCA GTGTGCGGCG ACCTATCTGC AGTCGGTGAG CACGCTGCAC GCGCAGGCCG AACAGCAGGC TGCACGACTG GGCGCGCAGC CTTCGTCGGC GCACCTGGAC CAGATCGAAT CCACCCTGCA TGCTGGACTG GAACACGCGT TTCATCGAGC AGCCCAGGAA CGCGAGCGTT TGATCCAGGG GGGCGACGAA TTCTTCCGCA AGGTGGTCGC GGTCGGCCGT GAATTCCTGC ATTCCACCTG GAATGGCCTG CCGGATATTC GCCATCCGCT GGACAACGAG ATTCCCGCCT GGACCCAACC GCCGGCGACC CAACCGCTTC CGGATCCCGC CGCACTGACC CAATCTCCCG GCGCCGCACC ATCGGTGGGC CTGGCCGGAC GCACCGAGGC CACCGCATGA
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Protein sequence | MSKNPVEQRI ALLRDEWMQA SDDPALRLFV WRVPANALRL LAAFFEAQKH PGDWNVPDYF LRLDTSFDTS FGYSRALKLA LSASYLGSQS ELREQGVDLG WRVPGPSHAD TAAGVQAVFE SFATHHAAYL RYLAVVLEPE RVTSPEAFIA WVDAAMAAST SPALRLVLVD TYEDPRWQPL LDRHAARAHR IAPQVDMFDI GREIAAQSGG AGPAVAYRQL LSDLMLVLER GSAAQLAQRI ERPMALAQRH GWSDHQVVLS MMLAGGWLKE KHYPAAISSY RQARDHATQA LTGGHPAARD LLMQGWFGEA GTWFAAGQPD RAVQGYLSAA QTAAEIPNPM FVIEAYRMAA FCLAQDGQRE AARNYGLEAV RAAKPLRSED RRSTTLPQTL QDLLVLQDKR RAHRIEQCAA TYLQSVSTLH AQAEQQAARL GAQPSSAHLD QIESTLHAGL EHAFHRAAQE RERLIQGGDE FFRKVVAVGR EFLHSTWNGL PDIRHPLDNE IPAWTQPPAT QPLPDPAALT QSPGAAPSVG LAGRTEATA
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