Gene Rpic_5024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_5024 
Symbol 
ID6289960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010683 
Strand
Start bp68209 
End bp69447 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content59% 
IMG OID642627418 
Producthypothetical protein 
Protein accessionYP_001901384 
Protein GI187930898 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.501103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCC TATTGGGATA CATCGTTGCG CTGGTGCTGT CGATGCTGAG TCTTGCCGGC 
TTCACGACAT GGGCCAAGGT CGGTGTCACC AACGTGCAAA CTGCGGCCGT GGCGAGCCAG
ATGCTCGTCT TCAACAAAGC TGCGCAGCAG TATGTGCAGG ACAACGCCGC TACGCTCGTG
GCTCAGGCTA CAGCTACTAC GCCAGTGTCG GTGACCACGG CCACGTTGAT CAATTCAACC
CCCTCATATC TGCCTGCGGG ATTTTCGTCG ACCAATGCCT TCGGTCAAAC CTGGCTACTA
CAGGTGCTGC AGCCGTCTGC GAACACGCTG CAATCCCTTG TGACCACACA GGGCGGCCGG
GCGGTCACCG ACGTCAAGCA GCTGGTGCAG ATCGCGGCGC AGGCTGGAGC GCAAGGTGGT
TTCGTGCCTT ACACCGGGCA ATTGGGCGAC GCAACCATGA CACCTAACAA TGCCTATGGC
GCGTTCGGCG GCTGGCGTGT GTCGCTCACC GGTTACACGA ACCCTGGAAG CGGCCACCTG
GCTTCGCTGT TGGCGTTTGG CGGCGCACAG GTCAACAACA ACTATCTGTA CCGGGTACAG
GTTCCTGGAC ACCCGGAACT CAACCAGATG CAGACAGCGC TCGACATGAC GGGCAACGAC
ATCAACAACA TCGGCAATGC GAACGCCACA CAGGCGCATC TGACCGGTAC TGGCGCCCCA
AACACGGCAT GCGCAAGCGC CGGTGCTATT CGCACCAGCA CGACGGGAAC CGGCCTAGTG
ATCTGCAGCG CCAGCACCGG CGTCTGGGAG CCGATTGGCA CCGCAGTAGC TAACGTCACC
AATGGCATGC CCTGCAACAA CAACGGTCAG ATCGCCACAG ATGCAACCAA TGCCGGTTAC
ATCTGTAAAA ACAATCAATA TGTGGCGATC AACAATGCGA TGGGCAGATT CGCGATCAAT
CGCCAGTTCA CAAATGTTAC TGACGGTATG ACCTTCGCCA AAGATAGTTG TCCCGGCGGC
ACGCCTTGGG CCATGTATAC GCCGGGGACA TTCCTTGTGA ACGATACCGG CTATGTGAAT
CCGCCAATTG AAGGAAACCT TTTCACCGCT ATCGACCAAG GCGCGGTCTG GTATGCGCAG
GCATCGGCCC GCTCGTCGTC GACCTGGTAC AGCGGGAACG ACACCGGAAA TCTTGGTGGC
CAGCTCGTGG GTACGCTGAC AACGGGCTGT CAGTATTGA
 
Protein sequence
MDALLGYIVA LVLSMLSLAG FTTWAKVGVT NVQTAAVASQ MLVFNKAAQQ YVQDNAATLV 
AQATATTPVS VTTATLINST PSYLPAGFSS TNAFGQTWLL QVLQPSANTL QSLVTTQGGR
AVTDVKQLVQ IAAQAGAQGG FVPYTGQLGD ATMTPNNAYG AFGGWRVSLT GYTNPGSGHL
ASLLAFGGAQ VNNNYLYRVQ VPGHPELNQM QTALDMTGND INNIGNANAT QAHLTGTGAP
NTACASAGAI RTSTTGTGLV ICSASTGVWE PIGTAVANVT NGMPCNNNGQ IATDATNAGY
ICKNNQYVAI NNAMGRFAIN RQFTNVTDGM TFAKDSCPGG TPWAMYTPGT FLVNDTGYVN
PPIEGNLFTA IDQGAVWYAQ ASARSSSTWY SGNDTGNLGG QLVGTLTTGC QY