Gene Rpic_5022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_5022 
Symbol 
ID6289958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010683 
Strand
Start bp66249 
End bp67274 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content58% 
IMG OID642627416 
ProductSCP-like extracellular 
Protein accessionYP_001901382 
Protein GI187930896 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.0390932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAACA CCAGCCAAAC AATCTGCATC ACCAAGTCGC TTGCCGCGCT CTCCCTCGTT 
GCCGCACTCG CAGCGTGCGG TGGTGGCGGT GGAGACAGTA GCACTTCCTC GTCGACAAGC
GGATCTTCAA GTTCGTCAGG AGGATCGCCG TCGCAAACCG TAACTGGCAC GCTATCAACG
CCTCAATACA CGAGCGGCAG CGCGCAAATC ACGGCCTTCA ATCTGCTCAA TCAATACCGT
GCCCAGTGCG GCATTCCCGC GCTGCAGGAG AACACCGTAC TGGATCAGGC AGCACAGAGC
CATGCAAAGT ACATGGGCCT CAACAGCGCC ATATCGGATA GCGAAACATC GGGAAGCGCA
GGATTTACCG GTGCGTCTTA TCAAGATCGA GCGGTGGCCG CAGGATTGCC GACTTCCACG
TTTAGCACAG GTGTGAGCGG AGGTGCTTCG ATCACAACTA ACGGCTTTAC GGCTGCTCAA
GCAGGGCAGA TGTTTGTCAA TTCCCTGCTG GCGGGGGTGT ACCACGCCGC AATCGTTGCT
TACCCTTCCA ATACGATGGG GATTGGGGAA TACGAAACGC AATCTACCAG CAGTGGTCTG
GCTTGGACGA ATGCGTGGGA AAGCATCAGC GTGCTGGTCA GCCAGTCTTC GATTTTTAGC
AACACGCCGC TTACGTTCCC CTGCCAAGGG GTTACCGGTG TGCCGTATAA ATCGACAAGC
GAGAGCCCCA CTCCGCCGAA CGTCTCGAAC TCGGGCTGGG GCACGCCGGT TGTCGTGATG
GGCAACACGT CCGACACGAT CATCCTGCAG AACGCATCCA TGACTGGCCC GTCAGGCAGC
GTTGCACTTC AGATCCTGAA TTCGACAACT GACCCGAACA AAGCTCTTGG TGCATATCAG
GCCGTCGCCT ACCCGACGTC GCCGCTGCTG CCGAATACGC AGTATTCGGT CACTCTGACC
GGCACCGTCA ACGGCACGGC GTTCTCGCGT AACTTTACGT TCACGACCGG CAATGTCGTG
GGTTAA
 
Protein sequence
MRNTSQTICI TKSLAALSLV AALAACGGGG GDSSTSSSTS GSSSSSGGSP SQTVTGTLST 
PQYTSGSAQI TAFNLLNQYR AQCGIPALQE NTVLDQAAQS HAKYMGLNSA ISDSETSGSA
GFTGASYQDR AVAAGLPTST FSTGVSGGAS ITTNGFTAAQ AGQMFVNSLL AGVYHAAIVA
YPSNTMGIGE YETQSTSSGL AWTNAWESIS VLVSQSSIFS NTPLTFPCQG VTGVPYKSTS
ESPTPPNVSN SGWGTPVVVM GNTSDTIILQ NASMTGPSGS VALQILNSTT DPNKALGAYQ
AVAYPTSPLL PNTQYSVTLT GTVNGTAFSR NFTFTTGNVV G