| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4986 |
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| Symbol | |
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| ID | 6289899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010683 |
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| Strand | - |
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| Start bp | 37498 |
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| End bp | 38652 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642627381 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001901347 |
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| Protein GI | 187930861 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00839264 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTGGGGAA TCGGGAGCCA GAATCGCTCG GAAGCCGCGC TCGCTCCATC GTACACAGGC
GCGCCCGTCG CTGTGCCTGC GTCGCCGTCG CGTGATGGCC AAGCCGTCAC TTTGAGCCAG
GGCCAATTGC AGTACATCAA GGTCGCACCT GTGGAGCTGC GTGCATTCGC CAGCCGGCGT
GAAGCCGCGG GCAATGTCGA TTTCAACGAG GACCACGCGG TGCAGGTCTT CACGTCATAC
CAGGGCAAGA TCCGCAACAC GTATGCCAAG GTGGGCGACA CCGTTGCCAA GGGCAAGCCG
CTGTTTGATA TCGAGAGCCC CGATCTGGTG CAGGCAGAAT CCACGCTGAT CTCCACTGCT
GGCACGCGCA AGCTGACGAC CGATGCGCTG GCCCGTGCGC GCCAGTTGTA TGAGATTCAG
GGCTTGGCAC AGAAGGATCT GGACCAGGCT ATCTCCGACC AGCAAGCCGC TGAGGCTGCC
TACAAGGCCG CGCGTGAAGC CCTGGCGGTA TTTGGCAAGA CACCCGCGCA GATGGACCAG
ATCGTCCAGA CGCGCAAGAC CGATTCGCTG CTGACAGTGG TCAGTCCGAT CTCGGGTCAG
GTGACTGCGC GCAGCGCCCA GCCGGGCTTG CTCTTGCAAC CGGGCAACGG CACGGCGCCA
TTCACGGTGG CTGACGTGTC AACCATGTGG ATGCAGGCCT TTGTGCCGGA AGCCGACGTG
CCGCTTCTGC ATGTTGGACA GCCTGTCAAG ATTCACGTCA TGGCATTCCC CGGCCGGGTC
TTCAACGGCA AGATCACCAC CGTGGGCGCG TCGGTCGACG CCAATACGCA CCGTATCCTG
GTGCGCTCGG AAATCGACGA CCCTAAGCAC GAATTGCGCC CCGGCATGTT CACCTCGTTC
GACATCACCA CCGGCGCGCC CATCCAATCT CCAGCATTGG CGATGGACGG CCTAGTGCGC
GAGGGTGACG GCACCATGAC CGCCTGGGTC ACCACCGACC GCAAGCGCTT TGCGCGGCGC
GTGATCAAGC TCGGCCTTGA GCAGGACGGC TTCGTGCAGA TCCTTGAGGG TCTGAACGCC
GGCGAACTGG TCGCCAATGA GGGTGCGTTG TACCTGAGCA CGGCTGCTTC CGGCAGCGTC
AATAGCGCTG ACTGA
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| Protein sequence | MWGIGSQNRS EAALAPSYTG APVAVPASPS RDGQAVTLSQ GQLQYIKVAP VELRAFASRR
EAAGNVDFNE DHAVQVFTSY QGKIRNTYAK VGDTVAKGKP LFDIESPDLV QAESTLISTA
GTRKLTTDAL ARARQLYEIQ GLAQKDLDQA ISDQQAAEAA YKAAREALAV FGKTPAQMDQ
IVQTRKTDSL LTVVSPISGQ VTARSAQPGL LLQPGNGTAP FTVADVSTMW MQAFVPEADV
PLLHVGQPVK IHVMAFPGRV FNGKITTVGA SVDANTHRIL VRSEIDDPKH ELRPGMFTSF
DITTGAPIQS PALAMDGLVR EGDGTMTAWV TTDRKRFARR VIKLGLEQDG FVQILEGLNA
GELVANEGAL YLSTAASGSV NSAD
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