Gene Rpic_4978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4978 
Symbol 
ID6289923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010683 
Strand
Start bp26095 
End bp27168 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content58% 
IMG OID642627373 
Producthypothetical protein 
Protein accessionYP_001901339 
Protein GI187930853 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00760749 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAACGT GGGCATGTGC AAAGACGCCG CTTTGGCCAG TTCGGTACAA GCCCATACCA 
GGTGAGCTTC TGTCGAGCTG GATCGTGCGA TTGGCCCATG GCCATGGAAT GAGTGTGATG
CCGTTCTGCA ATCTGGCACT CCGCCCTGCG GCTCGGGTGC TAACGGTGGA TATCGACCGA
CACGGCCCCG AGTCGCTATT GACATCACTG GCATTCCACA CAGGAACCCA TCTGGAGGTA
GTTCGTCAGG CCACGCTGCG GGCCTACGAG CGGATCCTGT ACCCACAGTT TCACATGGGA
GGATCCCTCC GGTGGGTGAT CTCTATCAAT CTGCCGCGAA ACTCCCGGTT CGGTCCGGGC
CTTCAGTTCT GCCCTTACTG TCTGAAGAGC GACCCGATAC CGTACTTCCG CCTCTGCTGG
CGAGTTGCAC TTCAAACCTT CTGCGAGCGA CACCAATGTC TACTGCTTGA TCGATGCCCA
AGCTGCGGCG CTTGCTTGTT CATCCAGCGG GTAGACGCGA ACTGGTGTCA TGCGGAAATC
GATGGCATTT GCCATTGCCA CAACTGCGAC TACGACCTCC GATTGGCGGA GGCGCCCGTC
ATAGACGATC GAGGGAGTGG TCTATTTCCT GAGTTGCAGC AGTTGACGCG CGAGCTTTCT
GTTTTGAACA CAGTGCGTCA GCGTGACCTG TTGGAGCGTC TGCACGCTAT CGCAGTGACT
GTGTTGTCAT GCAAGGTCAA GCCTCGGCTC TGCAATTGCC TAGCCTGCAG CTTCGGCTAC
TCCGACTTGG AGATTGAACA GCCAAGAAAG CCGGCACTGG AGCTGCAACC TGTACTAACT
CGCCACGCGG TGCTGTTGTG GTCGCTTTGG CTCCTTCAGC ACGACACCGA GGCGCAGGGC
GTACCGGTCA AGCCGATTGC TCCACTACAT CACCAATTCG TCAAGGACAT CCTGAACCAG
TACCGGCGCG ACGCGGGTTC GCCCGCGCGT CTTGATTCGC CAGTCGGGGC ACCAGCAGAC
GGGCGCGCCT CATCATCGAA GGTACGCGAT GGCCGCGTGG TTGAGTTGCA TTGA
 
Protein sequence
MKTWACAKTP LWPVRYKPIP GELLSSWIVR LAHGHGMSVM PFCNLALRPA ARVLTVDIDR 
HGPESLLTSL AFHTGTHLEV VRQATLRAYE RILYPQFHMG GSLRWVISIN LPRNSRFGPG
LQFCPYCLKS DPIPYFRLCW RVALQTFCER HQCLLLDRCP SCGACLFIQR VDANWCHAEI
DGICHCHNCD YDLRLAEAPV IDDRGSGLFP ELQQLTRELS VLNTVRQRDL LERLHAIAVT
VLSCKVKPRL CNCLACSFGY SDLEIEQPRK PALELQPVLT RHAVLLWSLW LLQHDTEAQG
VPVKPIAPLH HQFVKDILNQ YRRDAGSPAR LDSPVGAPAD GRASSSKVRD GRVVELH