Gene Rpic_4972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4972 
Symbol 
ID6289916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010683 
Strand
Start bp19859 
End bp21121 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content57% 
IMG OID642627367 
Producthypothetical protein 
Protein accessionYP_001901333 
Protein GI187930847 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value0.990538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.205743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACACT ACACATGGGT CTGGGGAAGT CCGCCGCCGC TGCTTAAGCG ACACAGCGAG 
GTCAAGCATG CGCTCCTGCG CAACTACTTG ATCGACTATT TCCTTACGCT GGTGCCGCTG
CCGCACCAGG ACAAGATCCA ACTGACCATC GTTGATGGCT TCTGTGGTGG TGGGCTCTAT
CTCAACGAGG ATGGCCAGGA AGTTCCGGGT TCACCTCTTG TCATTCTTGA GGCCATACGC
GAGGCCGAAA CGCTCCTGAA TGTTCGGCAG GAGCGTCGCA AGCCGATCCT GATCGACGTC
GAACTCATCT GCGTTGACGC CAAGATGCGG TCGTTGGACT ATCTTAGGCG TTTGCTGGAA
GAGCGCGGGT ACGGAGCCGC ACTCGCCAAC GGTAAGGTGC GCTTGGTCAA AGGCGAATTT
GTCGATCATT GCGGCGCGGC CATTCAACGG TGCCATGATC GAAGCCGCCG TTCAGGGCGA
GCGTTGTTTG TTCTTGATCA GTACGGCTAT TCCGACGTGC CGATGCACTG TTTGCGCGAT
ATTTTTGCCA AGCTCAAGCA CGCCGAGGTG ATCCTCACCT TTTATGTTGA TGCGCTGATC
AAGTACTTGA ATGAGCGCAA CCTAGCGGCC TTCCAAAAGG CCACAGGCGT CAGTACATCG
GTGCGGGCGT CCGAGCTCGA TGAGATCAAG CAGTCGCCAC GCTGGCGCGT ACATCTCCAG
TCCTCGCTCT ACCAGAATCT CACCGATCAA TGCTCGGCCC AGTTTTACAC GCCGTTCTTT
ATTCGCCCTG AGCGCGGGCA CGGAGATTTC TGGTTGCTGC ATCTCTCGCA GCATTGGAAA
GCTCGGGATG TGATGGCCTC CACGCACTGG CAGCACAACA ACCATTTCTC TCACTATGGG
GACGCCGGCT TCCACATGTT CAGCACGGGC TACATCAGCA AGATCGACGA TGAGCACAAG
CTGCAGGCAG GATTTGATTT CAGCGAAGTG GCGGCAGCAG TGAGCAAAGA AACCATGCTC
GAACAGATCC CCGAGATGTT GTTCGATGGC GCTGAGGGGA TGACCTTCGA GCAGTTCTTC
CTGAAGCTGA TCAACACAAC GCCTGCTACT CGCGAAATGG TGGAGGCCAG TCTGCTAGAG
CTTCACCAAG GCGGTGAGAT CGTCGTGGTC GATGAATCCG GCGCCCCCTC CAGGGCGCGC
GTCAGCCTGA AGAGCGATCA TGTTCTGCGC TTGCCGTCGC AGCGCTCCTT CTTGTTTTCT
TGA
 
Protein sequence
MPHYTWVWGS PPPLLKRHSE VKHALLRNYL IDYFLTLVPL PHQDKIQLTI VDGFCGGGLY 
LNEDGQEVPG SPLVILEAIR EAETLLNVRQ ERRKPILIDV ELICVDAKMR SLDYLRRLLE
ERGYGAALAN GKVRLVKGEF VDHCGAAIQR CHDRSRRSGR ALFVLDQYGY SDVPMHCLRD
IFAKLKHAEV ILTFYVDALI KYLNERNLAA FQKATGVSTS VRASELDEIK QSPRWRVHLQ
SSLYQNLTDQ CSAQFYTPFF IRPERGHGDF WLLHLSQHWK ARDVMASTHW QHNNHFSHYG
DAGFHMFSTG YISKIDDEHK LQAGFDFSEV AAAVSKETML EQIPEMLFDG AEGMTFEQFF
LKLINTTPAT REMVEASLLE LHQGGEIVVV DESGAPSRAR VSLKSDHVLR LPSQRSFLFS