| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3755 |
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| Symbol | trmE |
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| ID | 6287572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3937554 |
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| End bp | 3938999 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642627337 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001901303 |
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| Protein GI | 187930816 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTG CTGACCATCC CACCACCTTG CCGAATGCGT CGGCCGCGCC GCACGCGCCC
ATCCTCACGA TCCCGATCGC GGCGATTGCC ACCGCGCCCG GGCGGGGCGG CATCGGCGTG
GTACGTGTGT CAGGGCCCGA CGTGCGCGCT GTCATGCACG CCGTGTGCGG ACGCCTGCTG
ACGCCCCGCC AGGCAACCTA TCTGCCATTC CTCGATGCCG ACGGCAACGC CATCGACCGC
GGCATCGCGC TGTGGTTTCC CGCGCCGCAT TCGTACACAG GCGAAGACGT GCTCGAGCTG
CAGGGCCACG GCGGCCCTGT CGTGATGCAA CTGCTGCTGC AGCGCTGCCT GACCGCCGGC
CGCGAGATCG GCCTGCGCGT GGCCGAGCCC GGCGAGTTCA CGCGCCGCGC CTTCCTCAAC
GACAAGATGG ATCTGGCGCA AGCCGAGGCC GTCGCCGATC TGATTGAAGC CAGCACCGAA
GCCGCCGCAC GTTCGGCGGC GCGTTCGCTC GATGGCGCGT TTTCGCAAAC GGTGCATGCG
CTGGTCGAGC GGGTGATCCA TCTGCGCATG CTGGTGGAAG CGACGCTGGA CTTTCCAGAG
GAGGAGATCG ACTTCCTGGA AGCCTCCGAC GCGCGCGGTC AGCTCGCCAA CATTCGCACG
GCCGTCGATG GCGTGCTGGC GCAGGCGCGC CAAGGTGCGC TGCTGCGCGA AGGCCTGCAC
GTGGTGCTGG CGGGGCAGCC GAACGTCGGC AAATCGTCGC TGCTTAATGC GCTGGCCGGA
GCGGAACTTG CCATCGTCAC GCCCATCGCT GGCACCACAC GCGACAAGGT GCAGCAGACC
ATCCAGATTG AGGGTATCCC GCTGAACATC GTCGACACGG CGGGCCTGCG CGATACGGAA
GACGAAGTCG AGCGCATCGG TATCGAGCGC ACCTGGGCCG CCATCGCCCG CGCCGATGTC
GTGTTGCATC TGCTGGACGC GACGGACTAT CGCGCCAAGG GCCTCTCGCC CGAAGACACC
GCAATCGACG CCCGCATTGC CGAACACGTG CCTGCCGGCG TACCGACCCT GCGCGTCATC
AACAAGATCG ACCTCTCGGG CGTAGCTATA CCGTGCCGCG TGGATGCCGA ACCGCCCGAG
GTGTGGCTCT CGGCGCGCGA TGGCCTGGGC GTCGAACTGC TGCGCGCGGC GTTGCTGGAG
ATTGCCGGCT GGCAGGGCGG CGGCGAGGGG CTTTACCTCG CCCGCGAGCG CCATCTCGCG
GCGCTGCGCA CGGCCCGCGA ACATCTCGCC ACGGCGGCGG AGCACGCGGC ACAGCAAGCG
CAATCGCTGG ATCTGTTTGC CGAGGAACTG CGGCTTGCGC AGGAGGCGTT GAACAGCATT
ACGGGGGCGT TCTCCAGCGA TGATTTGCTG GGGGTGATTT TTAGCCGGTT TTGCATCGGC
AAGTGA
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| Protein sequence | MTAADHPTTL PNASAAPHAP ILTIPIAAIA TAPGRGGIGV VRVSGPDVRA VMHAVCGRLL
TPRQATYLPF LDADGNAIDR GIALWFPAPH SYTGEDVLEL QGHGGPVVMQ LLLQRCLTAG
REIGLRVAEP GEFTRRAFLN DKMDLAQAEA VADLIEASTE AAARSAARSL DGAFSQTVHA
LVERVIHLRM LVEATLDFPE EEIDFLEASD ARGQLANIRT AVDGVLAQAR QGALLREGLH
VVLAGQPNVG KSSLLNALAG AELAIVTPIA GTTRDKVQQT IQIEGIPLNI VDTAGLRDTE
DEVERIGIER TWAAIARADV VLHLLDATDY RAKGLSPEDT AIDARIAEHV PAGVPTLRVI
NKIDLSGVAI PCRVDAEPPE VWLSARDGLG VELLRAALLE IAGWQGGGEG LYLARERHLA
ALRTAREHLA TAAEHAAQQA QSLDLFAEEL RLAQEALNSI TGAFSSDDLL GVIFSRFCIG
K
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