| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3745 |
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| Symbol | |
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| ID | 6286888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3926595 |
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| End bp | 3927866 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642627329 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001901295 |
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| Protein GI | 187930808 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAACA CCCGCCGTTA TCACCAACTC GCTGCCGCCG CATTTATGGT GGTGGCACTT
GCAGCCTGCG GTAACAAGCA GGCACAAGGG CCGGGCGGCG CCGGCATGCC TCCGACCGAA
GTCGGCGTTG TGACCGTGCA GCCGCACTCT GTTGGCCTGA CCAGCGAATT GCCGGGCCGC
CTGGAGGCTA CGCGTGTGGC ACAGGTGCGC GCACGGGTCG CGGGCATTGT GCTCAAGCGC
ACCTACGCAG AAGGCAGTGA CGTGAAGGCC GGCCAGCAGT TGTTCCAGAT CGATCCGGCG
CAGTACCGGG CATCGCTGGA CAGCGCCAAG GCACAGCTGG CGCGTTCGGA AGCCACGCAA
ACGCAGGCGC AACTGAAGGC CGAGCGCTAC AAGCCGCTGG TTGCCACCAA CGCCATCAGC
AAGCAGGACT ACGACGACGC CACCGCCGCC GCCAAGCAAG CCACCGCTGA CGTGGCCGCC
GCCCGCGCTG CCGTGGAAAC CGCCAAGCTG AACGTGGGCT ACGCCAGCGT GACATCGCCC
ATTTCCGGCC GTGCCGGTCT GGCGCAGGTC ACTGAAGGCG CGCTGGTGGG CCAGGGCGAG
GCGACGCTGC TGACGACCGT GCAGCAGATC GATCCGATCT ACCTGACCTT CACGCAGTCG
AGCACCGAAG TGATGCGTCT GCAGCAGGCG CTCAAGGACG GCAAGCTGGC CAAGGCCGGG
GGTGATGCGG CCAAGGTCAC GCTCGTGACG GAAGACGGTC GCGCCTACGC GCAAACGGGC
AAGCTCTATT TCTCGGACCT GACGGTGGAC CCTGCTACGG GCACGATCAC GCTGCGCGCG
ATTGTTCCGA ACGCTGACCG CACGCTGCTG CCGGGCATGT ACGTGCGTGC CCGCCTGGAG
CAGGCCGTGG ACGAACAAGC CATCACGGTG CCGCAACAAG CGGTGACGCG CAGCCCGGAC
GGCGCCTCCG TCATGGTCGT CGACGAGAAG GGCACGGCAG CCGTGCGCCA GGTCCAGGCC
GACCGCTCGA CCGGTACGGA ATGGATCGTC TCCAACGGCC TGAAGGCCGG CGACAAGGTG
ATCGTCGACG GCCTGCAGAA GGTGCGTCCG GGAGCTCCGG TCAAGGCCGT GCCGTGGCAA
CCGATGTCGG CAGGCCAGGG CAAGGGCCCG CAAGGTCAGG GCGGCCAGGG TAGCGGCGCA
GCACCCGTAC CGGCAGCCAG CGCGCCTGCT GCAAGCACTC CCGCTGCCAG CGCACCGGCA
GCCAAGCAGT AA
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| Protein sequence | MTNTRRYHQL AAAAFMVVAL AACGNKQAQG PGGAGMPPTE VGVVTVQPHS VGLTSELPGR
LEATRVAQVR ARVAGIVLKR TYAEGSDVKA GQQLFQIDPA QYRASLDSAK AQLARSEATQ
TQAQLKAERY KPLVATNAIS KQDYDDATAA AKQATADVAA ARAAVETAKL NVGYASVTSP
ISGRAGLAQV TEGALVGQGE ATLLTTVQQI DPIYLTFTQS STEVMRLQQA LKDGKLAKAG
GDAAKVTLVT EDGRAYAQTG KLYFSDLTVD PATGTITLRA IVPNADRTLL PGMYVRARLE
QAVDEQAITV PQQAVTRSPD GASVMVVDEK GTAAVRQVQA DRSTGTEWIV SNGLKAGDKV
IVDGLQKVRP GAPVKAVPWQ PMSAGQGKGP QGQGGQGSGA APVPAASAPA ASTPAASAPA
AKQ
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