| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3733 |
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| Symbol | |
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| ID | 6287128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3912599 |
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| End bp | 3913912 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642627317 |
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| Product | type III effector Hrp-dependent outers |
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| Protein accession | YP_001901283 |
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| Protein GI | 187930796 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAG CGCCCACGTC CCGCCCGGTC CTCGGTTGCA TCGCCGACGA CTTCACCGGT
GCGACCGACC TCGCCAACAT GCTCGTGCGC GCTGGCATGC GCACGGTGCA GACCATCGGT
GTGCCGCAGG CCGGCGGCGA GGCCATCGCA GCGGATGCCG ATGCCATCGT CGTCGCGCTC
AAGTCGCGCA CGATTGCCGC GGCCGATGCC GTGGCGCAGT CGTTGAGCGC ACTGCGCTGG
CTGCGCGCGC AAGGCTGTTC GCGCTTCTTC TTCAAGTACT GCTCGACCTT CGACTCCACC
GACGCCGGCA ACATCGGGCC TGTGGCCGAG GCGTTGATGG CTGAACTGGG TACCGATTTC
ACATTGGCCT GTCCCGCCTT TCCCGAAAAC GGCCGCACGA TCTTCCGAGG CCATCTGTTT
GTGGGCGATG TGCTGCTCAA CGCGTCGGGC ATGGAGCACC ATCCGTTGAC GCCGATGCGC
GATCCGAATC TCGTGCCGGT GCTGGCTCGC CAGAGTGCGA GCAAAGTCGG CCTGCTGCGT
TACGACACCA TCATGCGCGG CGCACAGGCC GCTCGCGATC GGGCCCAGCA ATTGCGCGCC
GACGGGGTGA AGCTGGCAAT TGCCGATGCC ATATCCAACG ACGACCTGAT CGTCCTGGGC
GAGGCATTTG CCGATCTACC GCTGCTCACC GGCGGCTCGG GCCTGGCGCT TGGCCTGCCG
GCGCAATATC GCCGCGCGGG GCTGATCACC GCGCATGGCA ATACGGCGCA GCTGCCGATC
GTGGCCGATT CGGCGATCGT GCTGTCGGGC AGCTGTTCAC GTGCGACGAA CGCGCAGGTG
GCGCACTGGC GAGCATCGCG TCCGGCGTTC CAGGTGGATC CGCTGGCGCT GGCCGAAGGC
AAACCGGTGG TGGTCGAGGC GCTCGATTTC GTGCACCGCC ATGCAGGTCA GACGGTGCTG
GTATACGCCA CCAGTGCGCC GGAGCAAGTG GCACGCGTGC AGCAGACGCT GGGCGTTGAG
CGCGCGGGCA AGTTGGTGGA AGACGCACTG GGCCGCATCG CCCGCACGCT GCATGCCGAT
GGCGTGCGCC GCTTCGTGGT GGCTGGCGGC GAGACCTCGG GCGCGGTGGT GCAGGCGCTC
GATGTGCGTG CGCTGCGCAT CGGTCCGCAG ATCGACCCCG GTGTGCCCTG GACCGCCACC
ATCGATAGCG ATCCGCTTGC GCTGGCATTG AAGTCCGGCA ACTTCGGCAC GGTGGATTTC
TTCGAGAAGG CGCTCGCGCA ACTGGCGCAC GCAACCACGG AGCCGATCGC ATGA
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| Protein sequence | MSAAPTSRPV LGCIADDFTG ATDLANMLVR AGMRTVQTIG VPQAGGEAIA ADADAIVVAL
KSRTIAAADA VAQSLSALRW LRAQGCSRFF FKYCSTFDST DAGNIGPVAE ALMAELGTDF
TLACPAFPEN GRTIFRGHLF VGDVLLNASG MEHHPLTPMR DPNLVPVLAR QSASKVGLLR
YDTIMRGAQA ARDRAQQLRA DGVKLAIADA ISNDDLIVLG EAFADLPLLT GGSGLALGLP
AQYRRAGLIT AHGNTAQLPI VADSAIVLSG SCSRATNAQV AHWRASRPAF QVDPLALAEG
KPVVVEALDF VHRHAGQTVL VYATSAPEQV ARVQQTLGVE RAGKLVEDAL GRIARTLHAD
GVRRFVVAGG ETSGAVVQAL DVRALRIGPQ IDPGVPWTAT IDSDPLALAL KSGNFGTVDF
FEKALAQLAH ATTEPIA
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