Gene Rpic_3732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3732 
Symbol 
ID6287127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3911691 
End bp3912602 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content66% 
IMG OID642627316 
Product3-hydroxyisobutyrate dehydrogenase 
Protein accessionYP_001901282 
Protein GI187930795 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAT CGGCGGCTGA CCGGAAGGTT GGCGTGATCG GACTCGGCGC CATGGGTCTG 
GGCATTGCCA AGACCCTGCG TAATCACGGC TACACCGTGT ATGCCTGCGA TGCGCGCCCG
GGCGCTGCTG CAGATTTCGC CAAGGAAGGC GGCGTGGCCT GTGCAACGCC TGCCGAGGTG
GCAGCGGGTG TGGACGTGGT GGTCTCGGTG GTGGTCAACG CTGCGCAGAC GGAAGCCGTG
TTGTTCGGCG AGGCAGGCGC AGCGGGCGCC ATGCGACGGG GCAGCACGTT CGTCATGTGT
TCAACGGTGG ACCCGAACTG GTCGATAGCG CTGGAGGCGC GTCTCGCGCA GCAGGGCATT
CTGTACGTGG ATGGCCCTAT CTCCGGTGGC GCTGCCAAGG CCGCCTCGGG CCAGATGACC
ATGATGACCT CGGCCACGCC CGAGGCGTAT GCGGCGGCGG GCGACGTGCT CGATGCCATG
GCTGGCAAGG TCTATCGCCT GGGCGACAAG GCGGGCGCGG GCAGCAAGGT CAAGATCATC
AACCAGCTGC TGGCCGGCGT GCACATTGCC GCCGCCGCCG AAGCCATGGC ACTGGGCCTG
CGCGAAGGCG TGGCAGCGGA CGCGCTGTAC GAAGTCATCA CCCATAGCGC GGGCAACAGC
TGGATGTTCG AAAACCGCAT GGCCCACGTG CTGGCCGGCG ACTACACGCC GCTGTCCGCC
GTCGACATCT TCGTCAAGGA TCTGGGGCTC GTGCTCGATA CCGCGCGCGC GAGCAAATTC
CCGCTGCCAC TGGCGGCCAC CGCGCACCAG ATGTTCATGC AGGCGTCCAC CGCCGGCTAC
GCCAGGGAAG ATGACTCCGC CGTGATCAAG ATCTTCCCGG GGATCACATT GCCGGAGGGC
CAACCGAAAT GA
 
Protein sequence
MTQSAADRKV GVIGLGAMGL GIAKTLRNHG YTVYACDARP GAAADFAKEG GVACATPAEV 
AAGVDVVVSV VVNAAQTEAV LFGEAGAAGA MRRGSTFVMC STVDPNWSIA LEARLAQQGI
LYVDGPISGG AAKAASGQMT MMTSATPEAY AAAGDVLDAM AGKVYRLGDK AGAGSKVKII
NQLLAGVHIA AAAEAMALGL REGVAADALY EVITHSAGNS WMFENRMAHV LAGDYTPLSA
VDIFVKDLGL VLDTARASKF PLPLAATAHQ MFMQASTAGY AREDDSAVIK IFPGITLPEG
QPK