Gene Rpic_3728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3728 
Symbol 
ID6289557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3907738 
End bp3909204 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content67% 
IMG OID642627312 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001901278 
Protein GI187930791 
COG category[T] Signal transduction mechanisms 
COG ID[COG4564] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAAC GTACGCCGCG TTTTGCCATG AAGCTCCGCC AGAAGATCCT GCTGCTCGCC 
GTCGCGCCGC TGACCATCGC CATGCTGGCG ATCATGCTGA CCGTGCGGCA CCAGTCGATT
GCACTGGCGC GGCACGAACG ACAGTTGGTG GAATCGGCGT ACCTGCAGGC CAAGGAGACC
GAGCTGCGGT CTTACGTCAA GCTTGCGCAG AGTGCCATCG CGCCGTTGCT TGCGTCCGGC
CAAAGTGGCG ACCCGGCCCG GGACGAAGCC ACGCGCGACG AAGCGATGCG CACGCTCGCC
CGCCTCGACT TCGGCACCGA TGGCTACTTC TTCCTCTACG ACTTGCGCGG CCGCAACCTC
ATGCACCCGC GCCAGCCGGA ACTTGTCGGG CGCGACTTGT GGGACCTGAC GGACTCCGGC
GGCCAGCCGA CCATCCAGAA ACTGGTGGCT GCCGCCCAGG CCGGCGGCGG TTTCGTGCGC
TACATGTGGG ACAAGCCATC GACGCACCAG AGCGTGCCCA AGCTCGGTTA TGTCGAACCG
ATTCCACAGT GGGGCTGGAT GGTGGGCACC GGCCTGTACC TGGACGACAT CGAACAAACC
TTGCGTGAGA TCGACCGGCG CGCGCAAGCG AACATCGACC AGACATTGGC CTGGGTGGTG
GGCATCGCCG CGATCAGCAT CCTGCTGGTG GCCGGCAGCG GGCTGGCGCT GAACGTGAGC
GACCACCGCC AGGCCGATGC CAAGCTGCGC CAGCTCGCAC AGCAGGTGGT GAAGTCGCAG
GAAGACGAAC GTGCGCGTGT CTCGCGCGAG TTGCACGACG GCATCAGCCA GGTGCTCGTC
TCGACCAAGC TGCTGCTGGA AACCGCGCAT GGCCATCTCG AAGCGTCAGC GGCATCGCCG
ACGTCGATCG AACGGGCGGG CAGCATGCTG CGCCGGGCGC TCGACCGGTT GAACGGCGCG
CTGGGCGAGG TGCGGCGCGT GTCGCACAAC CTGCGCCCTG CGCTGCTGGA TGATCTCGGC
CTGGCTGCCG CACTGGAGCT GCTCGTGCGC GAAACGCGCG AGGCACATGA AGACAGCCAG
CCGGGGTCTG CGATTGCGCT TGAACTTGTC GGCCCGCCGG TGCAATTGCC GGATGCGTGC
AACACCGCGC TGTTCCGCAT TGCGCAAGAG GCCGTCTCGA ACATCGAGCG CCATGCCACG
CAAGCCACGC GCATCGGCGT GCTGCTTGAA AACGATATTG ATGCCGTGCG CTTGTCCGTT
CGCGACAACG GCCCCGGCTT CGACGTGGAA TCCGTGCAGG TGGACCCACA GCACGGCATC
GGCCTGCGCA ACATGCGTGA GCGCATGGCC GCCCTGGGCG GCACCTGTGC GATCGCCTCC
GGCCCGCACG GCACCGAGGT GTGCGCCGTG CTGCCGCATG TCGTCATCGC CCAACTGGCT
TCGGCCCCCT CTTCTCCACT CGTATGA
 
Protein sequence
MPQRTPRFAM KLRQKILLLA VAPLTIAMLA IMLTVRHQSI ALARHERQLV ESAYLQAKET 
ELRSYVKLAQ SAIAPLLASG QSGDPARDEA TRDEAMRTLA RLDFGTDGYF FLYDLRGRNL
MHPRQPELVG RDLWDLTDSG GQPTIQKLVA AAQAGGGFVR YMWDKPSTHQ SVPKLGYVEP
IPQWGWMVGT GLYLDDIEQT LREIDRRAQA NIDQTLAWVV GIAAISILLV AGSGLALNVS
DHRQADAKLR QLAQQVVKSQ EDERARVSRE LHDGISQVLV STKLLLETAH GHLEASAASP
TSIERAGSML RRALDRLNGA LGEVRRVSHN LRPALLDDLG LAAALELLVR ETREAHEDSQ
PGSAIALELV GPPVQLPDAC NTALFRIAQE AVSNIERHAT QATRIGVLLE NDIDAVRLSV
RDNGPGFDVE SVQVDPQHGI GLRNMRERMA ALGGTCAIAS GPHGTEVCAV LPHVVIAQLA
SAPSSPLV