Gene Rpic_3719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3719 
SymbolslmA 
ID6289629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3897055 
End bp3897705 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content65% 
IMG OID642627303 
Productnucleoid occlusion protein 
Protein accessionYP_001901269 
Protein GI187930782 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACG CGCAAACGGA GTTTCCGACC GCCGAGCCGG TCGCGGACGT CGCCATAGCA 
GCACCGCCGG TACGCAAACG CCCCCGCCCG GGCGAGCGCC GTGTGCAGAT TCTGCAGACG
CTCGCCGGCA TGCTCGAGCA TCCGCGTGGT GAAAAGATCA CAACCGCTGG CTTGGCGGCA
CGGCTGGACG TATCCGAGGC GGCGCTGTAC CGCCACTTCG CCAGCAAGGC GCAGATGTTC
GAAGGGTTGA TCGAATTCAT CGAGCAGACC GTCTTTGGCC TCATCAATCA GATCACGCTG
CGTGAAGAAC ACGGCCTGCG CCAGGCGCAT GCCATCGCGC ACATGCTGCT GTCGTTTGCC
GACAAGAACC CGGGCATGAC ACGCGTGCTG GTGGGCGATG CGCTGGTCGG CGAAGACGAG
CGCCTGCCCG AGCGCATGGC GCAGTGCCTG GATCGCATCG AAGCATCGCT CAAGCAGAGC
CTGCGCATGG CGGTCACGCA GGGTGCCTGG CCGGCAGATA CCGACATCGC TTCGCGCGCC
AACCTGCTCG TGTGTGCGGT GCTCGGGCGT TGGCATCGGT ATGCCAAGAG CGGTTTCCGG
AAGTCTCCGG TGGAAGGCGC GGACGCGCAG TTGCGGGTGC TGTTGGCCTG A
 
Protein sequence
MSNAQTEFPT AEPVADVAIA APPVRKRPRP GERRVQILQT LAGMLEHPRG EKITTAGLAA 
RLDVSEAALY RHFASKAQMF EGLIEFIEQT VFGLINQITL REEHGLRQAH AIAHMLLSFA
DKNPGMTRVL VGDALVGEDE RLPERMAQCL DRIEASLKQS LRMAVTQGAW PADTDIASRA
NLLVCAVLGR WHRYAKSGFR KSPVEGADAQ LRVLLA