| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3716 |
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| Symbol | |
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| ID | 6288204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3894457 |
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| End bp | 3895050 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642627300 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_001901266 |
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| Protein GI | 187930779 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02943] RNA polymerase sigma-70 factor, TIGR02943 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCATCG CACCCGACCA ACTCGACGCG CTGCGCCCTC ATCTGCTGCG CTTTGCGCAA
CTGCAATTGC GCGACACCGC CCTGGCTGAA GACACGGTGG CCGACACCAT CCTGGCGGTG
CTCGAACATC CCGAGCGCTT TGCCGGCAAC GCCTCGCTCA AGACTTACGT CATCGGCATC
CTTAAACACA AGATCATCGA TGCGATCCGC TCGGGGCGGC GCGAAGTGCG CGTCTCGCTG
CTTGCGGGCG GTGAGTCCGA CGAGGCCGGC ATGCGTTCCG ACGAGGCCGT CTTCGACAGT
CTGTTCGCCG CCGACGGCCA CTACACGAGC CCACCGTCCG ACTGGGGCGA CCCCGATGCC
GCGCTGTCAC GGCGCGAGTT TTTCGACGTG CTGCAAATGT GCGTCGATCG CCTGCCGCCG
CGCGTTGGGC GCGTCTTCAT GATGCGTGAG TGGCTGGAGC TGGAAACCGA CGAAATCTGT
CAGGAATTGC AGATCACGGC GACCAATGCC TGGGCACTGC TCTACCGTGC CCGCATGCGC
CTGCGCGAGT GCCTTGACCT GCACTGGTTC GGCAACCAGC CGGCCGCCGC CTGA
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| Protein sequence | MAIAPDQLDA LRPHLLRFAQ LQLRDTALAE DTVADTILAV LEHPERFAGN ASLKTYVIGI
LKHKIIDAIR SGRREVRVSL LAGGESDEAG MRSDEAVFDS LFAADGHYTS PPSDWGDPDA
ALSRREFFDV LQMCVDRLPP RVGRVFMMRE WLELETDEIC QELQITATNA WALLYRARMR
LRECLDLHWF GNQPAAA
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