Gene Rpic_3704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3704 
Symbol 
ID6287611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3884136 
End bp3884807 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content64% 
IMG OID642627288 
Producttranscriptional regulator, TraR/DksA family 
Protein accessionYP_001901254 
Protein GI187930767 
COG category[T] Signal transduction mechanisms 
COG ID[COG1734] DnaK suppressor protein 
TIGRFAM ID[TIGR02420] RNA polymerase-binding protein DksA 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGACTA AGACCAAGGA AGGACGCGGC GCCAACGGCG GTGCCGGGCG GTCCGTAACG 
GAGTCGGCAG CAGCCCAGGC TGCGCCAGCC ACCCGAAAAA AAGCGGCAGG GGGCGCCGCT
GCGGGAGAGG CAAAAGGAGG CGCGCGGGGC GGCAAGTCCG CCGCCAGCCA GAATGAGTCC
GACGCATCCC CGCGCGAGGA CGACGCGACA GCCGACACGG CGCGCGATTT ACCAGGATCA
TCCGCAGCAA CCATGAGCAG CAAGAAACTA CTCACCGAAG CCGAAATCCT GAAGATGGGC
GACAAGGATT ACATGAACGA GGCGCAGCTC GCCTTCTTCA AAGACCGGCT TGTAAAAATG
CGCGACGAAA TTCTCGCGAA CGCCAATCAG ACCGTCAGCG ACCTGCGCGA GACCGTAGTG
GTGCCGGACC CGGCTGACCG TGCCACCATC GAAGAAGAGC ACGCGCTGGA GTTGCGCACG
CGGGATCGTG AGCGCAAGCT GCTCAAGAAG GTGGAGCAGT CGATTGCCCG TATCGACGCT
GGCGACTACG GCTACTGCGA TGAAACCGGC GAGCCAATCG GCGTGCCGCG CCTGATCGCC
CGCCCCACCG CCAACCTGAC GCTGGAGGCG CAGGAGCGCC GCGAAAAGCG CCAGAAGATG
CATGGTGACT GA
 
Protein sequence
MVTKTKEGRG ANGGAGRSVT ESAAAQAAPA TRKKAAGGAA AGEAKGGARG GKSAASQNES 
DASPREDDAT ADTARDLPGS SAATMSSKKL LTEAEILKMG DKDYMNEAQL AFFKDRLVKM
RDEILANANQ TVSDLRETVV VPDPADRATI EEEHALELRT RDRERKLLKK VEQSIARIDA
GDYGYCDETG EPIGVPRLIA RPTANLTLEA QERREKRQKM HGD