Gene Rpic_3689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3689 
Symbol 
ID6289829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3868048 
End bp3869094 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content68% 
IMG OID642627273 
Productrod shape-determining protein MreC 
Protein accessionYP_001901239 
Protein GI187930752 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTACT CCCCGCCGCC CCTCTTCAAG CAGGGTCCGT CCGCCACCGC GCGGCTGGTC 
GCTTTGCTCG CGCTTGCACT TGCCTTGCTG GTGATCGATG CCCGCATGTC CGTGCTGGGT
GTAGTCCGGC AAGTCGTGTC GGTCATCCTG TACCCCGTCG AGCGCCTGGT GCTGATTCCA
CGCGATACGG CACGCGCCGC GCTCGATTAC ACCCAATCGT CCACCAGGCT GGCCGTCGAT
AACCGCAACC TGCGCGAATC GGCGGTTGCC CAGGCGCAGC AATCGCTGCG CGCCTCGCAG
CTCGAAGCCG AGAACCGCAA TCTGCGCACG CTGCTCAATC TGAAGCAGCA CGCGGCGGTG
CCCACGGTGG CGGCGGAAGT CCTCTACGAA GCACGTGACC CTTATACGCA GCGCATCGTG
ATCGATCGCG GCTCGAAGGA CGGCGTGCGC GCCGGCTACC CGGTCATCGA TGACCGCGGC
GTGGTCGGCC AGGTGACGCG CGCGTCGCTG TTCGAATCGC AAGTCACGCT GCTAACCGAC
AAGGACCAGT CGATCCCCGT GGAGGTGGTG CGCAACGGCC TGCGCAGCGT CGCCTTTGGC
GGTGCCCGAC CGGGCGCGCT GGACCTGCGC TTCATGGCCG CCTCGGCGGA TCTGCAGCAG
GGCGACCTGC TCGTGACGTC GGGGCTGGAC GGGGTCTATC CGGCGGGCCT GCCGGTGGCG
CGCATTTCGC AAATCGAGCG CAAGGCTGAT ACCGCGTTCT CGCGCGTGAT CTGCGAGCCG
GTGGCCGGCA TCCGCAGCAA CCGGCACCTG CTGATCGTGA AGTACGAATC GGGCTTCCCG
CCGCCGACGG ATCTGTCGCC GCCGCCCGCA GCCAAAGGCA AGAACGCTGC CCGCGATGCC
CGCGAAGAAA AGGACCGCGC CGCACGCGCC GCCGCCGAAG CCAATGTGCC GGCACCCGCG
CCCGCAGCCG ACGAAAACGC CCCGCCACCG CGCCCGACCG ACGCCGACGG CAATCCGCTG
GACACCGATT CAGCGCAAAA ACGCTGA
 
Protein sequence
MDYSPPPLFK QGPSATARLV ALLALALALL VIDARMSVLG VVRQVVSVIL YPVERLVLIP 
RDTARAALDY TQSSTRLAVD NRNLRESAVA QAQQSLRASQ LEAENRNLRT LLNLKQHAAV
PTVAAEVLYE ARDPYTQRIV IDRGSKDGVR AGYPVIDDRG VVGQVTRASL FESQVTLLTD
KDQSIPVEVV RNGLRSVAFG GARPGALDLR FMAASADLQQ GDLLVTSGLD GVYPAGLPVA
RISQIERKAD TAFSRVICEP VAGIRSNRHL LIVKYESGFP PPTDLSPPPA AKGKNAARDA
REEKDRAARA AAEANVPAPA PAADENAPPP RPTDADGNPL DTDSAQKR