Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3688 |
Symbol | |
ID | 6289828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 3867519 |
End bp | 3868031 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642627272 |
Product | rod shape-determining protein MreD |
Protein accession | YP_001901238 |
Protein GI | 187930751 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2891] Cell shape-determining protein |
TIGRFAM ID | [TIGR03426] rod shape-determining protein MreD |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTCGC CCCAATATCT GCTGCGCCCG GTCAACCCTG GCTTCATCGC TTTCAGCTTC GTGCTGGCGT TCCTGTTCAA CCTGATGCCG TGGGGCCACA TGCAGTGGAT TCCCGATCTG GTGGCACTGG TGCTGGTGTT CTGGAACATC CATCAGCCGC GCCGCGTGGG CATGGTGGTG GCTTTCCTGC TGGGCCTGTT GATGGACGTG CACGAAGCGC GCCTGCTTGG CGAACATGCG ATGGCGTACA CGATGCTGTC GTACTTCGCG ATCACGATTC ACCGGCGCGT GCTGTGGTTC ACGGTGCTGT CGCAGGCGCT GCATGTGCTG CCGCTGCTGG TGCTGGCGCA CGCCGTACCG ATCGTCATCC GTCTGCTGAT GGGCGCGCAC CTGCCGGACT GGCAGGTCAT CCTGCCGCCG CTGATCGAAG CCGCCCTGTG GCCGTTCGCC AACGCCTTCT TGCTGGCGCC GCAGCGTCGC CCGGAGAGCG TCGACGAAAC CCGGCCCATC TAA
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Protein sequence | MNSPQYLLRP VNPGFIAFSF VLAFLFNLMP WGHMQWIPDL VALVLVFWNI HQPRRVGMVV AFLLGLLMDV HEARLLGEHA MAYTMLSYFA ITIHRRVLWF TVLSQALHVL PLLVLAHAVP IVIRLLMGAH LPDWQVILPP LIEAALWPFA NAFLLAPQRR PESVDETRPI
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