| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3686 |
|---|
| Symbol | |
|---|
| ID | 6289826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 3863896 |
|---|
| End bp | 3865047 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642627270 |
|---|
| Product | rod shape-determining protein RodA |
|---|
| Protein accession | YP_001901236 |
|---|
| Protein GI | 187930749 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0772] Bacterial cell division membrane protein |
|---|
| TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.144684 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAAC TGGACAAGCG CCGCATATTC AACGTCATCA AATCGCTTTT CACCGGCTTC
GATGGCCCGC TGGCGCTGAT CGTCTTCCTG CTGCTCGGCA CGGGATTGGT CGCGCTGTAC
TCGGCCGCCA TCGACATGCC GGGCCGGGTG GAAGACCAGG TCCGCAACAT CCTGCTGTCG
TTCGTGCTGA TGTGGATCAT CGCCAACCTG CCGCAGCAGA CGCTGATGCG CTTTGCGGTG
CCGCTCTACA CCGTCGGCGT GGCGTTGTTG ATTGGCGTGG CGGCGTTCGG GCTGATCCGC
AAGGGCGCGC GGCGGTGGCT CAATATCGGC GTGGTGGTAC AGCCTTCCGA GATCATGAAG
ATCGCCATGC CGCTCATGCT GGCGTGGTAC TTCCAGAAGC GCGAGGGCGT GATCCACTGG
TACGACTATC TGGCGGCCGC CCTGCTGCTG CTGATTCCCG TGGGGTTGAT TGCCAAACAG
CCCGACCTGG GCACCGCGCT GCTGGTGCTG GCGGCAGGCA TCTACGTGAT CTACTTCGCC
GGGCTGTCTT GGCGGCTGAT CGTGCCGGTG CTGGTCATTG CTGTCACGGC GATCACGCTG
GTGGTGTCGT TCGAATCGCG CATCTGCGCA CCGGGCGTGA ACTGGCCGAT CCTGCACGAT
TACCAGCAAC ACCGCGTCTG TACGCTGCTC GACCCGACCA CCGACCCGCT CGGTAAGGGC
TTCCACACCA TCCAGTCGAT CATTGCCATC GGCTCGGGCG GCGTGACGGG CAAGGGGTGG
CTGAAGGGCA CGCAAACCCA CCTTGAGTTC ATCCCCGAGA AGCACACCGA CTTCATCTTC
GCGGTGTACT CGGAGGAATT CGGGCTGGTC GGCAACGGCG TGCTGCTGTT CCTGTATCTG
CTGCTGGTTC TGCGTGGGCT GTTTATTGCC GCCAATGCGG GCACGCTGTT CGGGCGCCTG
CTCGCCGGGT CCATCACGCT GATCTTCTTC ACCTACGCCT TCGTCAACAT GGGCATGGTG
AGCGGCATCC TGCCTGTCGT GGGGGTGCCG CTGCCGCTCA TCAGTTATGG GGGGACGGCG
CTTGTCACGC TGGGCATGGG CATCGGCATC CTGATGAGCA TCGCCCGACA GAAACGCTTC
GTGCAGACCT GA
|
|---|
| Protein sequence | MDKLDKRRIF NVIKSLFTGF DGPLALIVFL LLGTGLVALY SAAIDMPGRV EDQVRNILLS
FVLMWIIANL PQQTLMRFAV PLYTVGVALL IGVAAFGLIR KGARRWLNIG VVVQPSEIMK
IAMPLMLAWY FQKREGVIHW YDYLAAALLL LIPVGLIAKQ PDLGTALLVL AAGIYVIYFA
GLSWRLIVPV LVIAVTAITL VVSFESRICA PGVNWPILHD YQQHRVCTLL DPTTDPLGKG
FHTIQSIIAI GSGGVTGKGW LKGTQTHLEF IPEKHTDFIF AVYSEEFGLV GNGVLLFLYL
LLVLRGLFIA ANAGTLFGRL LAGSITLIFF TYAFVNMGMV SGILPVVGVP LPLISYGGTA
LVTLGMGIGI LMSIARQKRF VQT
|
|---|
| |