| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3683 |
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| Symbol | |
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| ID | 6288223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3858075 |
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| End bp | 3860705 |
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| Gene Length | 2631 bp |
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| Protein Length | 876 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642627267 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_001901233 |
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| Protein GI | 187930746 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid
[TIGR01057] DNA topoisomerase I, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAGG CTCTCATCAT TGCCGAAAAA CCGTCGGTCG CCGCTGATAT CGCGCGCGCG
CTGGGTGGCT TCACCAAGCA CGACGAGTAC TTTGAGAGCG ACGAATACGT CCTCTCGTCG
GCGGTTGGCC ACCTGGTCGA GATTGCTGCC CCCGACGAAT ATGAAGTCAA GCGCGGGAAA
TGGAGCTTCG CCCATCTGCC GGTGATCCCG CCGCACTTTG ATCTGCGCCC GATCGCCAAG
TCGGAGTCGC GCCTGAAGGT GCTGACGCGC CTGATCAAGC GCAAGGACGT CACGGGCCTG
ATCAACGCCT GTGACGCGGG GCGCGAAGGT GAATTGATCT TCCGCCTGAT CGCGCAACAC
GCGAACACCA AGCTGCCGGT GAAGCGCCTG TGGCTGCAGT CGATGACGCC GCAATCCATC
CGTGATGGCT TTGGCAAGCT GCGCAGCAAC GAGGACATGA TGCCGTTGGC GGATGCCGCG
CGCTGCCGCT CCGAGGCCGA CTGGCTGGTC GGCATCAACG GCACGCGCGC CATGACCGCG
TTCAACAGCA AGGGTGGCGG CTTCTTCCTG ACCACTGTGG GCCGCGTGCA AACGCCCACG
CTGTCGATCG TGGTGGAGCG TGAAGAGAAG ATCAAGCGCT TCGTCCCGCG CGATTACTGG
GAAGTACGCG CCGAATTCAT CGCCGCGGCC GGCCTGTACG AAGGCCGCTG GTTCGACCCG
AAGTTCAAGA AGGACGAGTT CGATCCCGAA CGCCGGGATT CGCGCCTGTG GAGCGAGGCC
GAGGCCAAGA GCATCGTTGC CGCGTGTCGC GACAAGCCGG GTTCGGTGAC GGAAGAATCG
AAGCCATCGA CGCAGATGTC GCCGGCACTG TTCGACCTGA CCAGCCTGCA GCGCGAGGCC
AACGGCCGCT TCGGCTTCTC GGCCAAGAAC ACGCTGGGCC TGGCGCAGGC GCTGTATGAA
AAGCACAAGG TGCTGACCTA TCCGCGTACC GATTCGCGCG CGCTGCCCGA AGACTACATG
GGCACGGTCA AGCAGACCCT CGACATGTTG GGCGAAAGCT CGCCCAACTA CCTGACGCAC
GCGAAGAAGA TTCTCGCCAA CCAGTGGGTC AAGCCGAACA AGCGGATCTT CGACAACAGC
AAGATCAGCG ATCACTTCGC CATCATCCCG ACGCTGCAGG CACCGAAGAA CCTGTCGGAG
CCGGAGCAGA AGCTGTACGA CCTGGTGGTG CGCCGCTTCC TGGCGGTGTT CTTCCCGGCG
GCCGAATACC AGGTCACCAC CCGCGTGACC GAGGTGGCCG GGCATCACTT CAAGACCGAA
GGCAAGGTGC TGGTGAACCC GGGCTGGCTG GTCGTCTATG GCCGCGAGGC ACAAGGCGAA
GATGCCAACC TCGTGCCGGT CGCCAAGGAC GAGAAAGTCA AGACTGACAA GGTCGAGCCG
GTCGGCCTGA CCACCAAGCC GCCCGCACGC TACAACGAAG CGACGCTGCT GTCTGCCATG
GAAGGTGCCG GCAAGCTCGT CGACGACGAT GCGTTGCGCG AAGCCATGGC CGGCAAAGGC
CTGGGCACGC CAGCCACGCG CGCGGCCATC ATCGAAGGGC TGCTGACGGA AAAGTACCTC
GTGCGTGAAG GCCGCGAGCT GATTCCGACG GCCAAGGCGT TCCAGCTGAT GACGCTGCTG
CGCGGCCTGG GCGTGGAAGA ACTGACGCAA GCCGAGTTGA CTGGCGGCTG GGAGCACAAG
CTTTCCCTCA TCGAGCGTGG TCAGCTGGAG CGTGACGAAT TCATGCGCGA GATCGCGCAG
ATGACGCAGC AGATCGTCAA GCGCGCCAAG GAATACGACA GCGACACCAT CCCCGGCGAC
TACGCGACGC TTTCCACGCC GTGTCCGCAA TGCGGCCACG TGGTCAAGGA GAACTACCGC
CGCTTCGCCT GCAGCCACTG CGACTTCTCG ATCAGCAAGA TCCCGGGTGG CCGCCAGTTC
GAGCTGGACG AGGTGGAAGA GCTGCTGACC AACAAGACCA TCGGCCCGCT GCAGGGCTTC
CGCAGCAAGA TGGGCCGGCC GTTTGCGGCC ATCCTCAAGC TGGCGCAGGA AGATGGTCAC
TGGAAGATGG AGTTCGACTT CGGCCAGAAC GACGAAGACG ATGGCGAGCC GGTCGATTTC
TCGGGCCAGG AAAGCGTCGG CCACTGCCCG AAGTGCAACG GCAACGTCTA CGAGCACGGT
CTGAAGTACG TGTGCGAGAA CGCCGTGGCG CAGCCCAAGA CCTGCGACTT CACCACCGGC
AAGATCATCC TGCAGCAGGA GATCAGCCGG GAGCAGTTAG CCAAGCTGCT GACCGAGGGC
AAGACCGACC TGCTGACGGG CTTCAAGTCG GCGCGCACGG GGCGCAACTT CAAGGCGTTC
CTGGTCAAGC AGCCGGACGG CAAGATCGGC TTCGAATTCG AGCCGCGCGG CGAAGGCAAG
GGCAAGCCCG GCGCCAAGAC CGCGGCGAAG AAGACGACGG CCGCGGCAAA AACGCCCGCT
GCCAAGAAGG CGCCGGCCAA GACCGCGGGC AAGACGGCCG CCAAGAAGGC TCCGGCGCGC
AAGAAAGCCA CGGAAGCCGA GACCGACGAG GAAAGCACCA GCGAAACTTG A
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| Protein sequence | MSKALIIAEK PSVAADIARA LGGFTKHDEY FESDEYVLSS AVGHLVEIAA PDEYEVKRGK
WSFAHLPVIP PHFDLRPIAK SESRLKVLTR LIKRKDVTGL INACDAGREG ELIFRLIAQH
ANTKLPVKRL WLQSMTPQSI RDGFGKLRSN EDMMPLADAA RCRSEADWLV GINGTRAMTA
FNSKGGGFFL TTVGRVQTPT LSIVVEREEK IKRFVPRDYW EVRAEFIAAA GLYEGRWFDP
KFKKDEFDPE RRDSRLWSEA EAKSIVAACR DKPGSVTEES KPSTQMSPAL FDLTSLQREA
NGRFGFSAKN TLGLAQALYE KHKVLTYPRT DSRALPEDYM GTVKQTLDML GESSPNYLTH
AKKILANQWV KPNKRIFDNS KISDHFAIIP TLQAPKNLSE PEQKLYDLVV RRFLAVFFPA
AEYQVTTRVT EVAGHHFKTE GKVLVNPGWL VVYGREAQGE DANLVPVAKD EKVKTDKVEP
VGLTTKPPAR YNEATLLSAM EGAGKLVDDD ALREAMAGKG LGTPATRAAI IEGLLTEKYL
VREGRELIPT AKAFQLMTLL RGLGVEELTQ AELTGGWEHK LSLIERGQLE RDEFMREIAQ
MTQQIVKRAK EYDSDTIPGD YATLSTPCPQ CGHVVKENYR RFACSHCDFS ISKIPGGRQF
ELDEVEELLT NKTIGPLQGF RSKMGRPFAA ILKLAQEDGH WKMEFDFGQN DEDDGEPVDF
SGQESVGHCP KCNGNVYEHG LKYVCENAVA QPKTCDFTTG KIILQQEISR EQLAKLLTEG
KTDLLTGFKS ARTGRNFKAF LVKQPDGKIG FEFEPRGEGK GKPGAKTAAK KTTAAAKTPA
AKKAPAKTAG KTAAKKAPAR KKATEAETDE ESTSET
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