Gene Rpic_3681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3681 
Symbol 
ID6287767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3856171 
End bp3857379 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content70% 
IMG OID642627265 
ProductDNA protecting protein DprA 
Protein accessionYP_001901231 
Protein GI187930744 
COG category[L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 
TIGRFAM ID[TIGR00732] DNA protecting protein DprA 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCGATG CCTCTCAGGC CGCGGCGTCC GCCGCGGCCG ATTCCACTGC CGCCCTCTCC 
TGCACGCGCG ATCCGACTGA ACTGGCCGGG TGGCTTCGTC TGACTGAAAC CCCCGGCGTT
GGGCCCGTTG CCGCGCGGCA ATTGCTGGCG GCTTTCGGGT TGCCGCAAGA CATCTTCGCC
CAGCCATATG CCGCGCTCGC CAAGGTGCTC CCGGAGCGGC AAGCGCGCGC GGTGCTCGCC
GAGCCCGACG ACACGCTCGC GGCGCTGATC GAGTGCACCG TCGCCTGGGT GAACGAGCCG
GGCAACGCCA TTTTCACGCT GGCTGATCGC GGCTACCCGC CCCGCCTGCT CGAACTGCCG
GACCCGCCGA CCCTCCTGTA CACCAAGGGC GACGCCTCCC TGCTGCGCGC CGCCGCGGTG
GGTGTGGTGG GCGCGCGCAG CGCCACGGCG GCCGGTATCG ACAACGCCCG GGCGTTTTCC
CAGGCGCTGT CGGCGGCGAG CGTGACCGTC GTGTCGGGCC TGGCGCTCGG CATCGATGCG
GCGGCGCATG AGGGCGCGCT GGCCGGCCCG GGAAGCACCA TCGCAGTCGT GGGTACGGGG
CTGGATATTG TTTACCCGGC CCGCAATCGG GCGCTGGCGC ATCGCATTGC CGAGGCTGGC
GTCATCATCT CCGAATACCC GCTTGGCATG GGCGCACGCG CCGAGAACTT CCCGCGCCGC
AATCGCCTGA TCTCGGGTTT GGCGCGTGGG CTGCTGGTGG TAGAGGCGGC GGCGCAGTCC
GGCTCGCTGA TCACCGCGCG GCTGGCGGCC GAGCAGGGGC GCGATGTGTT CGCGATTCCG
GGGTCGATCC ATTCGCCACT GGCCAAGGGC TGCCACCTGC TGATCAAGCA GGGCGCCAAG
CTAGTGGAAA CCGCCGCCGA TATCCTCGAC GAACTCGGCT GGGGCCGGGC GGCTGCGCCT
GCTAAACGTG CGACGCGTGC GGCCACGGCA CAAGCGCCTG CTGGCGCACC TGTCACTGTT
GCAGGCCCGG CGCCAAGTGC TTCTGAGGCC GCATTGCTCG ATGCGCTCGG CTTTGATCCC
GTCGATCTCG ATACCTTGTG TGAGCGCACC GGTCAGGGCG CTGCTGCGCT GTCCGCACAG
CTTCTGGCGC TGGAGCTCGA TGGCCGCGTC GAGCGTCGGC CCGGCGGGCG CTTCCTGCGG
CTTCCGTGA
 
Protein sequence
MTDASQAAAS AAADSTAALS CTRDPTELAG WLRLTETPGV GPVAARQLLA AFGLPQDIFA 
QPYAALAKVL PERQARAVLA EPDDTLAALI ECTVAWVNEP GNAIFTLADR GYPPRLLELP
DPPTLLYTKG DASLLRAAAV GVVGARSATA AGIDNARAFS QALSAASVTV VSGLALGIDA
AAHEGALAGP GSTIAVVGTG LDIVYPARNR ALAHRIAEAG VIISEYPLGM GARAENFPRR
NRLISGLARG LLVVEAAAQS GSLITARLAA EQGRDVFAIP GSIHSPLAKG CHLLIKQGAK
LVETAADILD ELGWGRAAAP AKRATRAATA QAPAGAPVTV AGPAPSASEA ALLDALGFDP
VDLDTLCERT GQGAAALSAQ LLALELDGRV ERRPGGRFLR LP