Gene Rpic_3675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3675 
Symbol 
ID6288933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3849445 
End bp3850305 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content66% 
IMG OID642627259 
ProductM48 family peptidase 
Protein accessionYP_001901225 
Protein GI187930738 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAACT GGATCAAGAC CTTCATGTTG ATGGCAGCGA TCACCGCGCT GTTCATCGTC 
ATCGGCGGCA TGATCGGCGG ACGCAGCGGG ATGATGCTGG CGCTGCTGTT CGCGCTGGGC
ATGAATTTCT TCTCGTACTG GTTCTCCGAC AAGATGGTCC TGCGCATGTA CAACGCGCAG
GAAGTCAACG AGACCAGCGC GCCGCAGTTC TACCGCATGG TGCAGGAGCT TGCCGGCCGC
GCCGGCCTGC CGATGCCGCG CGTCTACCTG ATCGACGAAG CCCAGCCCAA CGCCTTCGCC
ACCGGCCGCA ACCCCGAGCA CGCCGCCGTG GCGGCCACGA CTGGCATCCT CAACATCCTG
TCGGAGCGTG AACTGCGCGG CGTGATGGCC CATGAACTGG CACATGTGCA GCACCGCGAC
ATCCTGATCT CGACCATCTC GGCCACCATG GCCGGCGCGA TTTCGGCGCT GGCGAACTTT
GCCGTGTTCT TCGGCGGGCG CGACAGCGAA GGCCGTCCCG CCAACCCGAT CGCCGGGATT
GCGGTGGCGA TCCTCGCGCC GCTGGCGGCC GCGATGATCC AGATGGCGAT TTCCCGCGCG
CGTGAGTTCG AGGCCGATCG CGGGGGCGCG ACCATCAGCG GCGACCCGCA GGCGCTGGCC
TCAGCGCTGG ACAAGATCCA CCGCTATGCG GCCGGCATTC CGTTTGCCGC CGCTGAAGCC
CACCCGGCTA CCGCGCAGAT GATGATCATG AACCCGCTGC ACGGCGGGGG CCTGGCCAAC
CTGTTCAGCA CGCACCCGGC CACGGAAGAG CGCATCGCGC GCCTGATGCA GATGGCGCAG
ACGGGTCAAT ATCCGGCGTA A
 
Protein sequence
MFNWIKTFML MAAITALFIV IGGMIGGRSG MMLALLFALG MNFFSYWFSD KMVLRMYNAQ 
EVNETSAPQF YRMVQELAGR AGLPMPRVYL IDEAQPNAFA TGRNPEHAAV AATTGILNIL
SERELRGVMA HELAHVQHRD ILISTISATM AGAISALANF AVFFGGRDSE GRPANPIAGI
AVAILAPLAA AMIQMAISRA REFEADRGGA TISGDPQALA SALDKIHRYA AGIPFAAAEA
HPATAQMMIM NPLHGGGLAN LFSTHPATEE RIARLMQMAQ TGQYPA