| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3673 |
|---|
| Symbol | |
|---|
| ID | 6286748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 3847226 |
|---|
| End bp | 3847996 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642627257 |
|---|
| Product | putative proline rich signal peptide protein |
|---|
| Protein accession | YP_001901223 |
|---|
| Protein GI | 187930736 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTGTCA TCCTTCGCCC ATCGATCCGG CTGCTGCAAA CCCGGTTCCG GCAGATTCTG
CAACGGCTGG TCGCGCTGGT CGCATTGAGC ATGCTGTTCC TGTGGTGCCC GGTCACGGCA
TCCGCACAGT CCATCGAAAT CAACCGGGCC CAACTCGAAT ACGCCGACGG CGGCTGGAAC
CTGTCCGCCG ATTTCGATTT CGACCTGCCC AGCAACCTCG AAGACGCGGT CAACAAGGGC
ATCGCGCTCT ACTTCCTGGT CGAATTCGAA CTGATCCGCC CGCGCTGGTA TTGGTTTGAC
GACCACGCCA TCAGCGCCAC GCGCGTGGTG CGGCTGTCGT ATCACCCGCT CACACGCCAA
TACCGCGTAT CGACCGGCGG CCTGCAGGTG CCGTTCTCGC GGCTGAAAGA CGCCGTCGAC
TTCATGCAGC ACGTGCGCGG CTGGCGCGTG TTCGAGCAGC GCGCCGTCAA GGCCGGCGAA
ACCGTGCAGG CCGAGGTACG CATGCGCCTG GACGTGACGC AGTTGCCCAA GCCATTCCAG
ATCAACGCAG TCAACACGCG CGACTGGAAT CTCAGTTCAG AGTGGAGGCG CTTCAGCCTG
CTGGTGCCGA ACGAGCCGCC TGCCCCGGCG CCCACGCCTG CTGCGCCACC GGCCAGCCCA
CCGGCATCCT CGCCGCCTGC TTCCGGTTCG TCGGGCCTGT CGCCCAATCC GGGCTGGGGG
ATGAGCGCCG GCCCGTCCAG CGCAGGCACG TTGCTGGCGC CCGCCAAATG A
|
|---|
| Protein sequence | MTVILRPSIR LLQTRFRQIL QRLVALVALS MLFLWCPVTA SAQSIEINRA QLEYADGGWN
LSADFDFDLP SNLEDAVNKG IALYFLVEFE LIRPRWYWFD DHAISATRVV RLSYHPLTRQ
YRVSTGGLQV PFSRLKDAVD FMQHVRGWRV FEQRAVKAGE TVQAEVRMRL DVTQLPKPFQ
INAVNTRDWN LSSEWRRFSL LVPNEPPAPA PTPAAPPASP PASSPPASGS SGLSPNPGWG
MSAGPSSAGT LLAPAK
|
|---|
| |