Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3672 |
Symbol | |
ID | 6286747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 3844758 |
End bp | 3847229 |
Gene Length | 2472 bp |
Protein Length | 823 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642627256 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_001901222 |
Protein GI | 187930735 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTTCG ATCGCAGCTA CAAGCGGCTG CTCTATCAGG TGGTGGCCGG CACCATCGTC TTCCTGGCGA TCGTGCTGGT CGGGCTGCTG GCTGCCGCAT CGGCCAACAC CGAGTTCTTC GACCGGTATT TCGCGCTGCT CTACAAGGTC AACCTCGTCA TCGGGGTGCT GCTGGTGGTG ATCATCGGCG GGCTGATGCT GGCGCTGGCG CTGCGCGCGC GGCGCGGCAA GTTCGGCACG CGGCTGATGA CCAAGCTGGC GGTGTTCTTC GGCGTGGTGG GCGTCCTGCC GGGGGTGCTG ATCTATCTGG TGTCGCTGCA GTTCGTGTCG CGCAGTATCG AGTCGTGGTT TGACGTGAAG GTCGAATCGG CGCTGGAGGC CGGCCTGAAC CTTGGCCGCT CGACCATGGA CACGGCGCTG GCCGATCTGC AGAACAAGGG CCGCCTGATC GCGGAGCAGG TGGGCGATGG GTCCACCTCG GCCACGGCCA TCACGCTCAA TCGATTGCGC GAGCAGTTCG GCGTGCAGGA GGCGACCATC TTCACGGCCA GCGGCCGCGT GATCGCCACC GCGTCAAACA GCTACGACAC ACTTGTGCCG AACCTGCCCG ACCAGGCAGT GCTCGAACAG GCCCGCGCGC CGGGCGGCTA TGCCAGCGTG GAAGGCGGCA GCGATACCGA AACCGATGGC GCCTCCGCGC CGGCCGCCGC GGCGCCATCG GCACGCAACA GTGGCCGCCG CAGCGATCTA TACCAACTGC ATGTGGTGGT GGCGCTGGGC ACGTCGTTCC GCGAAGAGCC GAGCCTCGGG CTGAGCACGC CCGCACGCAA ATGGGCCGGC ACCGGTTTGC TGGCAGACCG CCGGCCGGAC GATGGCAGCA GCACTTCGCG CGGCTTCGGG CTGATCGGCG AGAGCGGCCG CGACGAACGC TTCCTGCAGC TCGTGCAACC GGTGCCGCAG GCGCTCGCCC GCAATGCCGA TGCCGTCCAG CGCGCCTACC AGGAATACCA GGAGAAAGCG CTCGGCCGCA CGGGCCTGCG CAAGATGTAC ATCGGCACGC TCACGCTCAC GCTGTTCCTG GCGGTGTTCA TCGCGGTGAT GCTCGCGCTG CTGCTCGGCG CACAGCTGGC ACGGCCGCTG CTGATGCTGC TCCAGGGCAC GCGCGAAGTG GCCGAGGGCG ACCTCTCGCC CAAGCGAGAG CTGCATACGC GCGACGAACT CGGCGTGCTC ACCCAACAGT TCAACCAGAT GACGCGGCAG CTGGCCGACG CGCGCCGCGC CGTAGAGCAG AATCGAGCGG CACTTGAGCA ATCGAAGGCC TATCTTGAGA GCGTGCTGAC CAACCTGACC GCCGGCGTCT TCGTGTTCGA CCATCGCTTC GTGCTGCTGA CTGCCAACCC GGGTGCCGAG CGCATCTTCA AACAGCCCTT CGGCGCGTGG GTCGGCCAGG CGCTGACCAG CATCACGCCG GTGGCCGCCT TCGCACCGGT GGTCGAACAG GCCTTTGCCG AACAAGACGC AAGCACGGCC GCCGGCGGCG CAGCAGCCCA CTGGCAGAAG CAGGTCGAAA TTCCGCTTGA AGACGAAGAT GAACCCCTCA CGCTGCTGGT GCGCGGCACG CGCCTGCCCG GCCCGTCGGT GGGCGCACAC GGCACCGAGC GCGGCTACGT GGTGGTGTTC GACGATATTT CCGACGTGAT CTCGGCGCAG CGCTCGGTGG CGTGGGGGGA GGTCGCGCGG CGCCTCGCGC ACGAGATCAA GAATCCGCTC ACGCCCATCC AGCTCTCTGC CGAGCGCCTG GAGATGAAGC TCTCGCCCAA GTTGTCGGAC ACCGACGCCG AAGTGCTGCG GCGCGGCGCC ACCACCATCG TCAACCAGGT GGCGGCGATG AAGCGCATGG TCGATGACTT CCGGGACTAC GCCCGCACAC CGCCGGCCAT GCTGCAGGAC CTGGACCTCA ACGCGCTTGC CGCCGAGGTG CTGCACCTGT ACGGCATCGA TCACCCTGAC CGCCGCGACC ATCCCGTCAT CGAGGCCAAG CTGGGCGCCA ATCTGCCGCT CATCAAGGGC GACCCGACGC AACTGCGCCA GGTCATCCAC AACCTCCTGC AGAATGCGCA GGACGCCGTG GCAGAGAACG AAGCGGCCGG GCGACCTGCT CCGCATGTCA TGTTGCAAAC TGACACGGTA GAATACGACG ACGCCTCGGG CGCGCGGCGG CAGGCCGTGC GGCTTGCGAT CGCGGACAAC GGCGGCGGGT TCTCTTCCCG CATCCTCAAC CGCGCCTTCG AGCCGTACGT CACGACCAAA GCCAAGGGCA CAGGATTGGG CTTGGCCATG GTGAAGAAAA TCATGGACGA GCACGGGGCG CGCATCGAAT TGCGCAACCG CCAGTCCAGC ACAACATCGG GCACATCGGG TACCGACATC GTCGGCGCCC AGGTTTCCAT ACTGTTCGTA AAACTCGCGT AG
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Protein sequence | MIFDRSYKRL LYQVVAGTIV FLAIVLVGLL AAASANTEFF DRYFALLYKV NLVIGVLLVV IIGGLMLALA LRARRGKFGT RLMTKLAVFF GVVGVLPGVL IYLVSLQFVS RSIESWFDVK VESALEAGLN LGRSTMDTAL ADLQNKGRLI AEQVGDGSTS ATAITLNRLR EQFGVQEATI FTASGRVIAT ASNSYDTLVP NLPDQAVLEQ ARAPGGYASV EGGSDTETDG ASAPAAAAPS ARNSGRRSDL YQLHVVVALG TSFREEPSLG LSTPARKWAG TGLLADRRPD DGSSTSRGFG LIGESGRDER FLQLVQPVPQ ALARNADAVQ RAYQEYQEKA LGRTGLRKMY IGTLTLTLFL AVFIAVMLAL LLGAQLARPL LMLLQGTREV AEGDLSPKRE LHTRDELGVL TQQFNQMTRQ LADARRAVEQ NRAALEQSKA YLESVLTNLT AGVFVFDHRF VLLTANPGAE RIFKQPFGAW VGQALTSITP VAAFAPVVEQ AFAEQDASTA AGGAAAHWQK QVEIPLEDED EPLTLLVRGT RLPGPSVGAH GTERGYVVVF DDISDVISAQ RSVAWGEVAR RLAHEIKNPL TPIQLSAERL EMKLSPKLSD TDAEVLRRGA TTIVNQVAAM KRMVDDFRDY ARTPPAMLQD LDLNALAAEV LHLYGIDHPD RRDHPVIEAK LGANLPLIKG DPTQLRQVIH NLLQNAQDAV AENEAAGRPA PHVMLQTDTV EYDDASGARR QAVRLAIADN GGGFSSRILN RAFEPYVTTK AKGTGLGLAM VKKIMDEHGA RIELRNRQSS TTSGTSGTDI VGAQVSILFV KLA
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