| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3663 |
|---|
| Symbol | |
|---|
| ID | 6286288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 3835761 |
|---|
| End bp | 3836765 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642627246 |
|---|
| Product | NADH dehydrogenase |
|---|
| Protein accession | YP_001901213 |
|---|
| Protein GI | 187930726 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCCCT CCAATCTGCT CATCTTTGGC GGTACCGGTT TTATCGGTTC GCAGTTGCTG
TCGCGGCTCG TGACGGAGAC ATTTTCTGCG CCGGGCCTGC CCGAAGGCCG CATGATCGTG
CCCACGCGCG ATCCTGAGTC GTCCCGCGCG CACAACCTCA CGCTGCTGCC CCGTGTGGAC
GTAATGGATG CCGACATCTA CGCCGACGAC GCCCTCGACG CGCTGTTCCT GGCGCTGACC
GAGCGCGGCG GCGAGCACTG TGCCGTCATC AACCTCGTCG GCGTGCTGCA GGATGCGCGC
GAGATGCCGT ACGGGCCGAA CTTCCAGCGC GTGCATGTCG ACCTGCCCCG CCGCATCGTC
GCCGCATGCC GACGCCATGG CGTGAACCGG CTGCTGCACA TGAGCGCGCT GGGCGCCGAC
CCGGCCGGCC CATCGATGTA CCTGCGCAGC AAGGGCGACG GCGAACGCGT GGTCATGAAC
AGCGAGCTTG ACTGGACGGT GTTCCGTCCC TCGGTAGTGT TCGGGCCGCA GGACCACTTC
CTGAATCTGT TCGCGAGCAT GCAGCGGATG GCGCCGTTTG TGCCGCTGGC CTGTGCCGAT
GCGCGCTTCC AGCCCGTGTA CGTGGACGAC GTGGCCGCCG CGTTCATCAA TGCGCTCAAG
AAGCCGGCGA CGATCCGGCA TGCTTACCCG CTGGTCGGGC CGCGCGTCTA TACGTTGGCC
GAACTGATGC GCTTTGCCGG ACGTGCCAGC GGCCACCCGC GCTGGATCGT GCCGCTGCCC
GAAGGCCTGG GTCGCATGCA GGCCGCGCTG CTGGAGCACC TGCCCGGCGC GCCGATCTCG
CGGGACAACC TCGACTCCAT GCGTGTGGAC AACGTCAGCA TGGAACCGGT CGCGCCCGAA
CTCGGCATCC ACCCGCTCGG CATGGAGGCC GTGATGCTGC CGGCCCTGGC CGGCTTGGGG
CCGGACCGCG GATTGCGTGC TGCACGTACG CGGGTCCATC GCTAG
|
|---|
| Protein sequence | MQPSNLLIFG GTGFIGSQLL SRLVTETFSA PGLPEGRMIV PTRDPESSRA HNLTLLPRVD
VMDADIYADD ALDALFLALT ERGGEHCAVI NLVGVLQDAR EMPYGPNFQR VHVDLPRRIV
AACRRHGVNR LLHMSALGAD PAGPSMYLRS KGDGERVVMN SELDWTVFRP SVVFGPQDHF
LNLFASMQRM APFVPLACAD ARFQPVYVDD VAAAFINALK KPATIRHAYP LVGPRVYTLA
ELMRFAGRAS GHPRWIVPLP EGLGRMQAAL LEHLPGAPIS RDNLDSMRVD NVSMEPVAPE
LGIHPLGMEA VMLPALAGLG PDRGLRAART RVHR
|
|---|
| |