| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3642 |
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| Symbol | |
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| ID | 6288027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3812645 |
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| End bp | 3814552 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642627226 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_001901193 |
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| Protein GI | 187930706 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCAAG CCAAAAACGC CCCCGCCGCA TCGTTCGACT CGCTGCAGTC CGAGCTCGAC
CAGAAGTTCG CCTATCCGGC CTCCAGCAAG ACGTACATCG TCGGCAGCCG CCCGGACATC
CGCGTGCCGA TGCGCACCAT CAAGCAGACC GCCACGCGCA CCGACAAGGG CGAGATGCTG
AACCCGCCGG TGCCGGTGTA CGACACGTCG GGCCCGTACT CCGATCCCGA TGTGCACATC
GACCTGCAGG CGGGCCTCGC CCCGCTGCGC GCCAAGTGGA TCGACGAGCG TGGCGATACG
GAAATCCTCT CGGGCCTGTC GTCCGAATAC GGCCAGACGC GCGCCAACGA CCCGGCCACG
GCGCACCTGC GCTTCTCGCA CATCTCCAAG CCGCGCCGCG CCAAGGCCGG CGCCAACGTG
AGCCAGATGC ACTACGCGCG CCGCGGCATC ATCACGCCCG AGATGGAATA CGTCGCGCTG
CGCGAATCGC TGAACCTGCA GGCACTGCAA GACAAGCCCG AGTACCGCCA ACTGCTCAAG
CAGCATCCGG GCTTCTCGTA CGGCGCGAAC CTGCCGCAGC GCCCGGAAGA CATCACGCCG
GAATTCGTCC GTGCCGAAGT CGCCGCGGGC CGCGCGATCA TCCCCGCCAA CATCAACCAT
ACCGAGCTGG AGCCGATGGC CATCGGCCGC AACTTCCGCG TGAAGATCAA CGGCAATCTC
GGCAACTCGG CGGTCACCTC GTCGCTGGCC GAGGAAGTGG AAAAGATGGT GTGGGCGATC
CGCTGGGGCG CCGACACGAT CATGGATTTG TCCACCGGCA AGCACATCCA CGAGACGCGC
GAATGGATCC TGCGCAACTC GCCGGTGCCC ATCGGCACGG TGCCCATCTA CCAGGCGCTG
GACAAGACCG GCGGCGTGGC TGAAGACCTG ACGTGGGAGA TGTTCCGCGA CACGCTCATC
GAGCAAGCCG AGCAAGGCGT GGACTACTTC ACCATCCACG CGGGCGTGCT GCTGCGCTAC
GTGCCGCTCA CGGCCGACCG CATCACGGGC ATTGTCTCGC GCGGTGGCTC GATCATGGCC
AAGTGGTGCC TCGCGCATCA CAAGGAAAAC TTCCTGTACA CGCACTTCGA CGAGATCTGC
GAAATCATGA AGGCGTACGA CGTGTCGTTC AGCCTGGGCG ATGGTCTGCG CCCCGGTTGC
ATTGCCGACT CGAACGACGC CGCGCAATTC GGCGAGCTGC ACACGCTGGG CGAGCTCACC
AAGAAGGCGT GGGAGCACGA CGTGCAGGTC ATGATCGAAG GCCCGGGCCA CGTGCCGCTG
CAGCGCGTGC AGGCCAACAT GGACGAAGAG CTGAAGCACT GCTTCGAAGC CCCGTTCTAT
ACGCTGGGCC CGCTTGTGAC CGACATCGCC CCGGGCTACG ACCACATCAC CAGCGGCATC
GGCGCGGCCA ACATCGGCTG GTACGGCACG GCCATGCTCT GCTACGTCAC GCCCAAGGAA
CACCTGGGCC TGCCGGACAA GGAAGACGTG CGCGAAGGCA TCATCACCTA CAAGATCGCC
GCGCATGCAG CCGACCTTGC CAAGGGCTGG CCGGGTGCGC AGCTGCGTGA CAACGCGCTG
TCGAAGGCAC GCTTCGAATT CCGCTGGGAA GACCAGTTCA ACCTCGGCCT CGATCCGGAG
AAGGCACGCG CCTTCCACGA TGAAACGCTG CCGGCCGAGG GCGCCAAGAT CGCGCACTTC
TGTTCGATGT GCGGTCCGAA GTTCTGCTCG ATGAAGATCA CGCAGGAAGT GCGCGACTAC
GCGGCCACGC TCGACGCCAA CGCCACCGCC GCCGCAGTTA ACCCAACTGC GGGCATGGAA
GAGAAGTCGA TCGAGTTCCG CAAGAGCGGC AGCAAGATCT ACAGCTAA
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| Protein sequence | MPQAKNAPAA SFDSLQSELD QKFAYPASSK TYIVGSRPDI RVPMRTIKQT ATRTDKGEML
NPPVPVYDTS GPYSDPDVHI DLQAGLAPLR AKWIDERGDT EILSGLSSEY GQTRANDPAT
AHLRFSHISK PRRAKAGANV SQMHYARRGI ITPEMEYVAL RESLNLQALQ DKPEYRQLLK
QHPGFSYGAN LPQRPEDITP EFVRAEVAAG RAIIPANINH TELEPMAIGR NFRVKINGNL
GNSAVTSSLA EEVEKMVWAI RWGADTIMDL STGKHIHETR EWILRNSPVP IGTVPIYQAL
DKTGGVAEDL TWEMFRDTLI EQAEQGVDYF TIHAGVLLRY VPLTADRITG IVSRGGSIMA
KWCLAHHKEN FLYTHFDEIC EIMKAYDVSF SLGDGLRPGC IADSNDAAQF GELHTLGELT
KKAWEHDVQV MIEGPGHVPL QRVQANMDEE LKHCFEAPFY TLGPLVTDIA PGYDHITSGI
GAANIGWYGT AMLCYVTPKE HLGLPDKEDV REGIITYKIA AHAADLAKGW PGAQLRDNAL
SKARFEFRWE DQFNLGLDPE KARAFHDETL PAEGAKIAHF CSMCGPKFCS MKITQEVRDY
AATLDANATA AAVNPTAGME EKSIEFRKSG SKIYS
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