Gene Rpic_3638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3638 
Symbol 
ID6287973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3802453 
End bp3803361 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content63% 
IMG OID642627222 
Productextracellular solute-binding protein family 3 
Protein accessionYP_001901189 
Protein GI187930702 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTCG CTGCGCGCAC GTGGCTGCTG GCCGCGCTTG CCGTTCCCGC TGCTGTTTCC 
ACCGCCTTCT TCCCGTCCAA CGCCGTTGCC GCTACCCCGG CGCTCGATCG CATCCGCGAC
TCGGGCACGG TGCATGTGGC GTATCGGGAA GACTCCATTC CTTTTTCGTA CCTCGATGGC
AGCAAGCCGG TCGGCTACGC CATCGACATC TGCTCGCGGC TGATCGATTC GATCAAGACC
TCGCTCAAGC GCCCTGACCT GAAGGTGCAG TACGTGCCGG TGACAGCCGC CACGCGCATG
GACGTGGTCG CTTCGGGCAA GGCCGACCTG GAATGCGGCT CGACCAACAA CTCACGCGAG
CGCCGTGAGA AGGTCGCCTT CACGATTCCG CATTACATCA CCAAGGGCCG CATGCTGGTA
AGGACCGGCT CGCCGATCCA GCAATGGGAA GACCTCAACG GCAAGACGGT AGTGGCCGCG
CGCGGCTCGA CCAATGCCGA CCTCGCACGC AAGCTCAACG AGACGGGCAT GACGATGCAG
GTGGTCGATG CCAACGATCT GCGCAGCGCG TTTGCGATGC TGGCCGATGG CCGCGCCAAC
GCGTTTGCCG GTGACGACAT CCTGCTCTCG GGCATGCGCG CCACGGCCAA GAACCCGGCC
GACTACCGCC TGGCGGGCAA GACGCAGCTC GTGTCGTCGT ACGCGATCAT GCTGAGCAAG
CAGGACCCGG AGTTCAAGAA GCTGATCGAC CAGTCGATGA CGCGGCTGAT TGTCGATGGC
GAGGTGCCGA AGCTCTACAA GAAGTGGTTC CAGCAGCCGA TTCCGCCCAA CGGGGTGAAT
CTGGAGGTGC CGATGAGTTA TTTGCTGCGG GATTCGTTTA ATACGCCTAC GGATAGTGCT
GGCAACTAA
 
Protein sequence
MPFAARTWLL AALAVPAAVS TAFFPSNAVA ATPALDRIRD SGTVHVAYRE DSIPFSYLDG 
SKPVGYAIDI CSRLIDSIKT SLKRPDLKVQ YVPVTAATRM DVVASGKADL ECGSTNNSRE
RREKVAFTIP HYITKGRMLV RTGSPIQQWE DLNGKTVVAA RGSTNADLAR KLNETGMTMQ
VVDANDLRSA FAMLADGRAN AFAGDDILLS GMRATAKNPA DYRLAGKTQL VSSYAIMLSK
QDPEFKKLID QSMTRLIVDG EVPKLYKKWF QQPIPPNGVN LEVPMSYLLR DSFNTPTDSA
GN