| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3637 |
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| Symbol | |
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| ID | 6287972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3800439 |
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| End bp | 3802169 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642627221 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001901188 |
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| Protein GI | 187930701 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.67419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAACG ATTTGCCCAC CTCGGCCCTC ACCTTCGATT ACGTCATCGT CGGCGCCGGT
TCGGCCGGTT GCGCGCTCGC CAGCCGGTTG ACCGAAGACC CGGACGTGAC GGTCGCGCTG
CTCGAAGCCG GCCCGCACGA TCATCACCTG TCGGTCTGGG TGCCGGCCGG TTGTGCGGCA
TCGCTGCCGT TCAAGAACAA GCGCAACTAT GGATTCCAGA CCGTGCCGCA AGCGGGGCTG
GGCGGCCGCC AGGGCTATCA GCCGCGCGGG CGGGGGCTGG GCGGCAGCTC GTCGCTCAAC
GCCATGATCT ACATCCGCGG CACGCCCAGC GACTACAACC ACTGGGCGGC GCTCGGCTGC
ACCGGCTGGG GTTGGAGCGA TGTGCTGCCC TACTTCAAGC GCTCCGAAGG CAACGAGCGT
TTTGCCGGCC GTGATGACGA CGCGCTGCAC GGCGGCACCG GCCCGCTGCA CGTGAGCGAC
CTGCGCACCG GCAACCCCAT CGCACAGCGC TTTGTCGAGG CCGGCGTGGC GGCAGGCTAT
CGCCGCAACA ACGATTTCAA CGGCCCCGAC CAGGAAGGCG TCGGCCCGTA CCAGGTCACG
CAATACAACG GCGAGCGCTG GAATGCCGCG CGCGCCTACC TGCATGGCGG GGACAAGGCC
GACGCCACCT TCAGCCGCAA TCGCCGCCAG TTGACGGTGT TGCCCGACAC GCAGGCCCTG
CGGATCGTGT TCGACGGCAA GCGCGCGGCA GGCGTGGTGG TCGAGCGGGC GGGCCGCACA
GAAACGCTGC GCGCGCGCCG CGAGGTGATC GTCTCATCGG GCGCGTTTGG GTCGCCGCAG
TTGCTGATGG CCTCGGGCGT GGGCCCGGCG GAGCATCTGC GCTCGCTGGG CATTCCGGTC
GTACACGACC TGCCCGGCGT CGGCCAGAAC CTGCAGGACC ACCTCGACAT CATCCTGCAC
AAGAAGGTCT TCAACCTGGA CCTGATCGGC TATTCCGCGC GCGGCAGCGC CCGCATGCTG
AGCGAGATCC TGCGCTACCG GCGCGAGCGT CGCGGCATGC TGGCAACCAA CTTTGCTGAA
GCCGGCGGCT TCATCAAGAG CCGGCCCGAT CTGGCCGATC CCGATCTGCA ATTGCACTTC
GTGGTGGCCA TGGCCGACAA CCACAACCGC ACGTTCAACT ACGGCCACGG CTATTCATGC
CACGTGTGCG TGCTGCGCCC GAAGAGCCGC GGCGAAGTGC GCCTGGCCTC CGCCGACACG
CGCGACGCAC CGCTGATCGA CCCGCGTTTC CTGTCCGACC CCGATGACAT GACCGGCATG
CTCGCCGGCT TCCGCGCCGT GAAGAGCATC TTCGCGCAGC GCCCGCTGGC CGACCTGGGC
GGGCGCGAGT TGTATTCCGG AAACATCCGC GGCGACGGCT CCGACGACGA AGCCGTGCGC
GCCCTGATCC GCCAGCATGC CGACACCATC TATCACCCCG TCGGCACCTG CAAGATGGGC
AGCGCCGACG ACGCAATGGC CGTCGTGGAC CCGGAACTGC GCGTGCGTGG CCTGACAGGC
CTGCGCGTGA TCGACGGCTC CGTCATGCCG ACGCTGATCG GCGGCAACAC CAACGCCCCG
ATCATCATGA TTGCCGAGCG CGCTGCCGAC CTGATGCGCC AGGGCGGACG CCTGACGTTG
AATGTGGTGA GCGGCATCCC CGCGCAAGCA GTACCGGCCG AGGTGCATTG A
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| Protein sequence | MANDLPTSAL TFDYVIVGAG SAGCALASRL TEDPDVTVAL LEAGPHDHHL SVWVPAGCAA
SLPFKNKRNY GFQTVPQAGL GGRQGYQPRG RGLGGSSSLN AMIYIRGTPS DYNHWAALGC
TGWGWSDVLP YFKRSEGNER FAGRDDDALH GGTGPLHVSD LRTGNPIAQR FVEAGVAAGY
RRNNDFNGPD QEGVGPYQVT QYNGERWNAA RAYLHGGDKA DATFSRNRRQ LTVLPDTQAL
RIVFDGKRAA GVVVERAGRT ETLRARREVI VSSGAFGSPQ LLMASGVGPA EHLRSLGIPV
VHDLPGVGQN LQDHLDIILH KKVFNLDLIG YSARGSARML SEILRYRRER RGMLATNFAE
AGGFIKSRPD LADPDLQLHF VVAMADNHNR TFNYGHGYSC HVCVLRPKSR GEVRLASADT
RDAPLIDPRF LSDPDDMTGM LAGFRAVKSI FAQRPLADLG GRELYSGNIR GDGSDDEAVR
ALIRQHADTI YHPVGTCKMG SADDAMAVVD PELRVRGLTG LRVIDGSVMP TLIGGNTNAP
IIMIAERAAD LMRQGGRLTL NVVSGIPAQA VPAEVH
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