Gene Rpic_3625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3625 
Symbol 
ID6289259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3792654 
End bp3793973 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content69% 
IMG OID642627209 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001901176 
Protein GI187930689 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCAG CCACATCTGC GGCTGCATCC GTGCAGCAGC GGCTATCGGT GTGGCTGTCG 
GTGATCATCG TGGCGGTGGC GGTGCTGGCC GGCGGCTTTG CGTTTGCCTC GGCTTTTCGC
GAAGCGCATG AATTGCAGGA CGACGTCTTG CGCCAGGTCG GGGCGATGTT CGACCCCGGC
CACCTGCCCG CACCAGGCGA GGCGGCCGAC GCGCCCAAGG TCTCGGACAC GGAGGCGCGC
GTGATCGTGC AGGTGTTGCC GCCGGCCGGC GCGGTGCCTG CGGCCAGCCC GCCCGTGCTG
ACCGACGGCA TGCAGACCGC ACGCCTGGGC AAACGCGACT ACCGCGTGTG GATCCGCACG
CTCGCCAACG GCCAGCGCAT CGCTGTGGCG CAGGAAACCG CCGTGCGAGA CGAAACCGCC
CGCGACAGCG CTCTGCGCAC GTTGATGCCG TTCCTGATAC TTGTGCCGAT CCTGCTGCTG
GCCGTCGCCC ACGTGTTGCG CAAGATGTTC GCGCCCATCA AGCGGCTCGC GCATGAGGTG
GACCAACGCG ACGAGCGCCA ACTGCACGCC ATCGCCCCCG AAGCCGTGCC CGACGAGGTG
CGCCCGTTCG TGGTGGCGAT CAACCGCCTG CTCGCGCGCG TGCAACAGTC CATGGACGCC
CAGCACCGCT TTGTCGCCGA TGCCGCGCAC GAACTGCGCA CGCCCCTTTC CGCACTGTCG
TTGCAGGCCG AGCGGCTCGG GCAGGCCGCG ATGTCGCCCG ACGCGCAGGC GCGGCTTGGC
ACGCTGCGCC AGGGCATCGA GCGTAGCCGT GGGCTGCTCG AACAGCTCCT CACCCTGGCG
CGCGCGCAAG AGGCCACCGG CGTGCCAACG GGCACCGTCT CCGTCCAGAG CGTGTTCCGC
AGCGTGCTGG AAGACCTCAT GCCGCTTGCC GACGCCAAGC AGCTCGACAT GGGCGTCACC
ACCGAAGCCG ATGCGCGCGT GCATGCCAAC GAGCTCGATC TCTTCGTCGT GGTGCGCAAC
CTCGTGGACA ACGCCATCCG CTACACACCG GAAGGCGGTC GCATCGACCT GTCGGTGGCC
ATTGACGCGG AGGTTGTGTC GATTGCCGTG CAGGACACCG GCCCCGGCAT CCCCATCGAC
GAACGCGCAC GCGTGTTCGA CCCGTTCTAT CGCGTGCTCG GCAACGAGGC GACCGGCTCG
GGGCTCGGGT TGTCGATCGT GAGTACGGTG GTGCGGCGAC TCGGCGGGGA GGTTGACCTC
GGCGAGCCGG ATGATCGTGC CAGCGGGTTG CGGGTGACGG TGCGGTTGCC GACCGCCTAG
 
Protein sequence
MTAATSAAAS VQQRLSVWLS VIIVAVAVLA GGFAFASAFR EAHELQDDVL RQVGAMFDPG 
HLPAPGEAAD APKVSDTEAR VIVQVLPPAG AVPAASPPVL TDGMQTARLG KRDYRVWIRT
LANGQRIAVA QETAVRDETA RDSALRTLMP FLILVPILLL AVAHVLRKMF APIKRLAHEV
DQRDERQLHA IAPEAVPDEV RPFVVAINRL LARVQQSMDA QHRFVADAAH ELRTPLSALS
LQAERLGQAA MSPDAQARLG TLRQGIERSR GLLEQLLTLA RAQEATGVPT GTVSVQSVFR
SVLEDLMPLA DAKQLDMGVT TEADARVHAN ELDLFVVVRN LVDNAIRYTP EGGRIDLSVA
IDAEVVSIAV QDTGPGIPID ERARVFDPFY RVLGNEATGS GLGLSIVSTV VRRLGGEVDL
GEPDDRASGL RVTVRLPTA