Gene Rpic_3617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3617 
Symbol 
ID6286317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3787609 
End bp3788445 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content62% 
IMG OID642627201 
Producthypothetical protein 
Protein accessionYP_001901168 
Protein GI187930681 
COG category[R] General function prediction only 
COG ID[COG3257] Uncharacterized protein, possibly involved in glyoxylate utilization 
TIGRFAM ID[TIGR03214] putative allantoin catabolism protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAGA CCACGTATTA CGCGCCGCAT GGCGGCCATC CGCCGCAGAC GGATCTGCTA 
ACCGATCGCG CGATGTTCAC CGAGGCGTAC GCGGTGATCC CCAAGGGGGT GATGCGCGAC
ATCGTCACAA GCTGGCTGCC GTTCTGGACC CAGACGCGCC TGTGGGTGAT CGCCCGCCCG
CTCTCGGGCT TTGCCGAGAC CTTCTCGCAG TACATCGTTG AAGTGAACCC GGGCGGCGGC
AGCGACAAGC CCGAGCAAGA CAAGAACGCC GAAGCCGTGC TGTTCGTCGT GGAAGGCGAA
GCGGAGCTGA CGCTGCAGGG CAAGAAGTAC ACGCTCACGC CGGGCGGCTA CGCCTTCATT
CCGCCGGGCG TTGACTGGAC GCTACATAAC GTCAGCGATG CTGCGGTGCG CTTCCACTGG
ATCCGCAAGC ACTACCAGGT CGTCGAGGGC ATTCCCCTGC CGGAAGCCTT CGTGACCAAC
GAACAGGACG TCGAGCCGAT CCCGATGCCG GGCACCAACG GCGCATGGGT GACGACACGC
TTTGTCGACA TGAGCGATAT GCGCCACGAC ATGCACGTCA ACATCGTCAC GTTCGAGCCG
GGCGGCGTGA TCCCGTTTGC CGAAACCCAC GTGATGGAAC ACGGCCTGTA CGTGCTCGAA
GGCAAGGCAG TCTATCGCCT CAATCAGGAC TGGGTCGAAG TGGAAGCCGG CGACTTCATG
TGGCTGCGCG CGTTCTGCCC GCAGGCCTGC TATTCGGGTG GCCCTGGCCG CTTCCGTTAC
CTGCTGTACA AGGATGTGAA CCGTCACATG AACCTGACGT TGAACCCGTC GCGTTAA
 
Protein sequence
MSKTTYYAPH GGHPPQTDLL TDRAMFTEAY AVIPKGVMRD IVTSWLPFWT QTRLWVIARP 
LSGFAETFSQ YIVEVNPGGG SDKPEQDKNA EAVLFVVEGE AELTLQGKKY TLTPGGYAFI
PPGVDWTLHN VSDAAVRFHW IRKHYQVVEG IPLPEAFVTN EQDVEPIPMP GTNGAWVTTR
FVDMSDMRHD MHVNIVTFEP GGVIPFAETH VMEHGLYVLE GKAVYRLNQD WVEVEAGDFM
WLRAFCPQAC YSGGPGRFRY LLYKDVNRHM NLTLNPSR