| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3611 |
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| Symbol | |
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| ID | 6289470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3781584 |
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| End bp | 3783041 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642627195 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_001901162 |
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| Protein GI | 187930675 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.444902 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGTTC ATTTGACGAT CCACGGCCGG CACGACCTTG CCGGCCAACT CTATCGACAA
CTCCGCACCG CCATCCTCGA TGGTCGGCTC GTGCCGGGCG AGCGTCTGCC CTCCACGCGC
GACCTCGCGC TGCAGATCGG TGTGTCGCGC AAGACCACGC TCGACGTATT CGAGCGCCTC
ATTGCGGAAG GCTATCTACA GCCGCGCGCC GGCTCCGGCA CGTTTGTGGC CGAAGCCACC
GAAGGATTGC GCGCTCGCAC GCCGGCCGCC TCGCCTGCGG CGCAACTTGC GTCGCCCACG
CCAGCCCCAC GCATCTTCGA CACGCCGTGG AACAACATGC CGGCGGTGCT GCCCCAGCCG
CGCGAGAATA TCCTCCACGA TTTTGTTGGC GGGGTGACGG AGAAGCGCCT TTTCCCGTTC
GACGTGTGGC GCCGCTGTGT TGCGCATGCG CTGCGCCAGC AGGCACGCGG GCGTGGCGGC
TATCAGGACC CTGCGGGCGA CCAGGCGCTG CGCCTGGCCA TCTCGCGGTA TCTCGCATTC
AGCCGCGCGG TGGTGTGCGC GTGGGCCGAT ATTGTCGTCA CCCAGGGCGC GCAGCAGGCC
ATCGACCTGA TCGCTCGCGT GCTCGTGCGC CCCGGGGATA CGGTGGCGAT TGAAGACCCG
GGTTACCCGC CCGCGCGCAT TGCGCTGCAG GCGCTGGGTG CCAAGGTCGT GCCGGTGCCG
GTCGATGCGG AAGGCCTGGT CGTCGATGCG CTGCCCAAGC GCGCCAAGCT CGTCTACGTA
ACGCCGTCGC ACCAGTTTCC GCTGGGCATG CCGATGAGCC TGGCGCGCCG CGCGCAACTG
CTCGACTGGG CGCAGCGCCA TGACGCGCTG ATCATCGAAG ACGATTACGA CAGCGAATTC
CGCTTCGACG GCCGTCCGAT GGAATCACTC AAAAGCCTGG ACGCTGCCGG TTGCGTGGCA
TACGTGGGTA CGTTTTCGAA GACGATCTTT CCGGAGCTGC GCATCGGCTA CGTGGTGCCG
CCGGCTTCGC TGGTGGCGCC GCTGCGGCAC GCCAAGCAGG TGGCCGATTG GCACAGTGAA
TCGCTCATGC AGGCGGCGCT CGCCAAATTC ATGCTCGACG GCGACTTCGG CAAGTACCTG
CGGCGCATGC ACAAGGAATA CGCCGTGCGC CGCAATACGC TGCTGCGGCA TCTGCGTGGT
CCGCTGGCAC CGTGGCTGAC GCCCGTGCCG TCGGCGGCGG GCATTCACAT GGCGGCGCAG
TTGCAGACGC CCTTGCCCGA AGCCGAACTC GTCAAGCTGG CAGAGAGCGT GGGTGTCGGG
CTATACGGCA CCGCGAGGAT GTTTGTGGCG CGGCCGCCGC AGCCGGGGCT GCTGATCGGC
TACGGCCACG TGAACGTTGC GGAGATCGAC GCGGGCCTCG GCAAGCTGGC GGAGGTGCTG
GCCAAGGTGG CTACCTGA
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| Protein sequence | MDVHLTIHGR HDLAGQLYRQ LRTAILDGRL VPGERLPSTR DLALQIGVSR KTTLDVFERL
IAEGYLQPRA GSGTFVAEAT EGLRARTPAA SPAAQLASPT PAPRIFDTPW NNMPAVLPQP
RENILHDFVG GVTEKRLFPF DVWRRCVAHA LRQQARGRGG YQDPAGDQAL RLAISRYLAF
SRAVVCAWAD IVVTQGAQQA IDLIARVLVR PGDTVAIEDP GYPPARIALQ ALGAKVVPVP
VDAEGLVVDA LPKRAKLVYV TPSHQFPLGM PMSLARRAQL LDWAQRHDAL IIEDDYDSEF
RFDGRPMESL KSLDAAGCVA YVGTFSKTIF PELRIGYVVP PASLVAPLRH AKQVADWHSE
SLMQAALAKF MLDGDFGKYL RRMHKEYAVR RNTLLRHLRG PLAPWLTPVP SAAGIHMAAQ
LQTPLPEAEL VKLAESVGVG LYGTARMFVA RPPQPGLLIG YGHVNVAEID AGLGKLAEVL
AKVAT
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