Gene Rpic_3587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3587 
Symbol 
ID6286537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3754648 
End bp3755454 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content61% 
IMG OID642627171 
Producthypothetical protein 
Protein accessionYP_001901138 
Protein GI187930651 
COG category 
COG ID 
TIGRFAM ID[TIGR02001] conserved hypothetical protein, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00011907 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCCA AGGTTTCTTT GCGCGCCACC GTCATGGGTG GCGTTGTCTT CTGTGCCGCA 
GCACTGTCCA GCGCGGCCGC TTTTGCGCAG GCCACTGACG CTGCGCCGGC ACCCGTTGCC
GGTCCGGCCG CCCCTGCCAG CCCGTTGACG GCCAACGTCA CGCTGGCCAG CCAATACCGC
TATCGCGGTC TCATGCAGAC CAACAACAAG CCGGCCATTC AGGGCGGTGT GGATTACGCG
CTGCCCAACG GCTTCTACGT GGGCAACTGG AACTCGTCGA TCAGCTGGCT GGGGGATTCC
AACCCCAACG TCTCCGCCCC CATCGAGATG GATTTCTACG GCGGCTACAA GACCGAGCTG
ATGAAGGACG TGCCCATTGA TGTGGGCCTG CTGCAGTACT ACTACCCGGG CAGCTACCCC
GACGGCTACA CCCGCCCGCA CACCACCGAA GGTTATGCAC AGATCGGCTA CGGGCCGGTC
TCGTTCAAGT ACTCGCACGC GTTCTCCAAC CTGTTCGGCT TTGCAGATAG CCACCACAGC
CAGTACTTCG ATCTGTCGGG CAACTTCGAC ACCGGTTTCT GGGGCCTCAC GCTGAACCTG
CACGTGGGCT ACCAGCAGGT GCCACATCAG GTGGTGCGCA CGTCGTATGC CGACTGGAAG
GTCGGCGTAA CGAAGGATTT TGGTTCGGGC TGGACAGCTT CTTTGAGCTA CATCGACACG
AATGCATCGC GTCTGGCCTA CACCAACACA CGTAACAGCT ACATGGGCAA GGCAAGCGCC
CTGCTCGCCG TGACCAAGAC GTTCTAA
 
Protein sequence
MQAKVSLRAT VMGGVVFCAA ALSSAAAFAQ ATDAAPAPVA GPAAPASPLT ANVTLASQYR 
YRGLMQTNNK PAIQGGVDYA LPNGFYVGNW NSSISWLGDS NPNVSAPIEM DFYGGYKTEL
MKDVPIDVGL LQYYYPGSYP DGYTRPHTTE GYAQIGYGPV SFKYSHAFSN LFGFADSHHS
QYFDLSGNFD TGFWGLTLNL HVGYQQVPHQ VVRTSYADWK VGVTKDFGSG WTASLSYIDT
NASRLAYTNT RNSYMGKASA LLAVTKTF