Gene Rpic_3586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3586 
Symbol 
ID6286536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3753181 
End bp3754281 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content44% 
IMG OID642627170 
ProductRelA/SpoT domain protein 
Protein accessionYP_001901137 
Protein GI187930650 
COG category[S] Function unknown 
COG ID[COG2357] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000408505 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCAC TTGATTTTGA TGCAGAAAAG GCAGCTTTTC GTGAGTACTA TGATGTTGAG 
CGTCCGCTGC TCGAAGGGGC AATCGAGTCG TTTCTCACAT TGATTCGCTC CTTGCTGGCA
TCAGCTAACC TTACGGCCTC GAAGATTGAG GGCCGTCTAA AGGAGCGTGA AGAGTGCATA
AAAAAATTCA GCCGCAAATA TCGAAGTGAT CTGGAGGCCA ATAATACGCA ATACGAAATC
AAGGCGCATA TAACGGATTT GATTGGGTTG CGTATTGTCT GTTTATACGA AGACGAGATT
GAGGCCGTAA AAGATTTGAT CCATAAGCAT TTTAAAGTGC TGTCTGTAAC AGATAAGATT
GCCCAAATTG AAGGTACGGA AAACTCCTTC GGATACAAGG GGCTTCATCT TGATCTTAAA
TTAAACGATG ATCGGCTCGG GCTTCCTGAA TATCGAGTTT ATGGCAGCAT ACCTTTTGAG
CTTCAAATAC GTACGGTTGT CCAGGATTCA TGGAGTATCT TGGATCACAA GATAAAGTAT
AAGAAATCAA TTCCGGGCCG CCTAAAACGT AGAATTAATA CTCTCGCTGC GTTGTTCGAA
CTCGCTGACC GCGAGTTTCG TGAGGTGCGT GATGCCACGC TTGCCGAAAT TAAGAGAGCT
GAAGCTGAAA CCGAAGACGT CGATCTGGAA GATTCTCCTG CGCAAGAGCC GGTTGTTGAA
GATTTGGATA TTGGCACATC GGATGTTGAG CCGAAGCAAT ATGCCCCCCT CAATGCGTTT
AGATTTCTAA AGATTGCGAA GCATTTTTTC CCGGGATTTG ATTTTGAGGC GCACAAAGTC
GATGGATTTG CGGCGGAAAT CATTAGATGC AAGCCGGGAA TTAGTCGCGG GAAATTTAAT
TTTTATATGA AGGAAAATAT TGCCGAGGTA AAGAAATATC AAGCTTATTT TGAAGCATCT
AATCCCGGCG ATACTTTGAA TGCATATACC TTAATCAGAC ATTGCTTGTA TGCGGGTGAT
CCAGATATCT TCTCCAGCAT GCTTAATAAC ATTTCTCGAG AGTCATTTGA GAGGTGGAGA
GCGGAAAATG CTGGGGACTA G
 
Protein sequence
MASLDFDAEK AAFREYYDVE RPLLEGAIES FLTLIRSLLA SANLTASKIE GRLKEREECI 
KKFSRKYRSD LEANNTQYEI KAHITDLIGL RIVCLYEDEI EAVKDLIHKH FKVLSVTDKI
AQIEGTENSF GYKGLHLDLK LNDDRLGLPE YRVYGSIPFE LQIRTVVQDS WSILDHKIKY
KKSIPGRLKR RINTLAALFE LADREFREVR DATLAEIKRA EAETEDVDLE DSPAQEPVVE
DLDIGTSDVE PKQYAPLNAF RFLKIAKHFF PGFDFEAHKV DGFAAEIIRC KPGISRGKFN
FYMKENIAEV KKYQAYFEAS NPGDTLNAYT LIRHCLYAGD PDIFSSMLNN ISRESFERWR
AENAGD