Gene Rpic_3572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3572 
Symbol 
ID6286873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3741260 
End bp3742309 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content65% 
IMG OID642627156 
Productdienelactone hydrolase 
Protein accessionYP_001901123 
Protein GI187930636 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.660184 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAGGC TCTCGACCGT CGGCTTGTTG CGCCGCCTGT TCCGCGTTGT TTCCGTCATG 
GCGCTGATCT CCGCGCCCGC ATCGGCGCAG CAAATCGTCA GCGATCTCTC GGCACAACCC
ACCGGCCGCA TCCACTTCAA CAGCGTCACC CCCAAGAGCA AATGGGAGCT GGTGCATCGC
AAGTTCGCCA AGACGCCCAC GCCCGTCTGG GGCACGTTGT ACCTGCCCGA GAACCTGCAG
GGCCCGGTGC CAGCGATGGT GATCTCGCAC GGCTCGGCCG GGCCGCAGCA GAAAGACGTC
GACCGGTGGG TGCGGCTGTT CAACCAGATG GGCATGGCCG CGTTCGTGGT GGATTCGTTT
GGCCCACGCG GCATTGCCAA TACGATGGAC AACCAATCGC AGTTGAACCC CGCCGCCAAC
GACGCCGATG CCCTGTTCGC GCTCAAGCTG CTGAGCACCG ACCCGCGGAT CGACCCGAAG
CGCATCGGCC AGATCGGGTT CTCGCGCGGC GGTGGTGTGT CACTGGACAT GACGCTCGAC
GCGTTCCGCA AAGGCGTCAT CGATGACGAC ACGCGGTTTG CAGCGCTCAT CGGCTTCTAC
CCCGGGTGCT CGGCGCTCTG GTGGGAGATC CCGCCGCCAC CGCTGACCGG CGCCCCGCTG
ATGCTCGCGC TGGGCGAGAA AGACGACTAC ACACCCGCGC AGTTCTGCCG CAACGCCGCG
GAGATCATGC AGCGTGATGG GCAGACCGTG GAGATGCACG TGTACCCCGG CGCGTATCAC
GACTTCGACA ACACGCGTGC GTACTTCAAG TACTTCCCAG GTGCGACTAC GGCGCGCGAT
TGCCCGCAGA CCCTGATCGA CGTGCAGCAC GATGCGTACT ACCGGCTGCC AGGCGGCGAG
AAGTACGCCA ACCTCCAGGC CATGCAGGCC GACTACACGC GCTGCACCAC CCGGGGTGTC
TCCACTGGCG CCAACCTGGA GCAAGCCAAA CGCGCCGAGG CCGACGTCAA CGCGTTCCTG
GTGAAAGCCA TGGGCCTGTC GCCGCGCTAA
 
Protein sequence
MRRLSTVGLL RRLFRVVSVM ALISAPASAQ QIVSDLSAQP TGRIHFNSVT PKSKWELVHR 
KFAKTPTPVW GTLYLPENLQ GPVPAMVISH GSAGPQQKDV DRWVRLFNQM GMAAFVVDSF
GPRGIANTMD NQSQLNPAAN DADALFALKL LSTDPRIDPK RIGQIGFSRG GGVSLDMTLD
AFRKGVIDDD TRFAALIGFY PGCSALWWEI PPPPLTGAPL MLALGEKDDY TPAQFCRNAA
EIMQRDGQTV EMHVYPGAYH DFDNTRAYFK YFPGATTARD CPQTLIDVQH DAYYRLPGGE
KYANLQAMQA DYTRCTTRGV STGANLEQAK RAEADVNAFL VKAMGLSPR