| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3560 |
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| Symbol | |
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| ID | 6287173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3726918 |
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| End bp | 3728972 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642627144 |
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| Product | 5'-Nucleotidase domain protein |
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| Protein accession | YP_001901111 |
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| Protein GI | 187930624 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | [TIGR01390] 2',3'-cyclic-nucleotide 2'-phosphodiesterase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGTCC GACCATTGTG TTCGGCGGCG TTGCCGCTTG CTGTTTTCTT GTCGATGTCG
CTGGCTGCCT GTGGTGGCAG CGACGATACT CCGACCACGC CTGCCGCCAG CGCTGCCCCC
GCGGGCACCA AGGCCACGCT GGCCGTGCTG GAAACGACCG ACCTGCACAC CAACGTGCTG
TCGTACGACT ACTTCAAGCT TGCTGCCGAC AATTCGCTCG GCTTCGAGCG CGTGGCGACG
CTCATCAATC AGGCGCGCAC GCAATTCCCG AATACGCTGC TGCTGGACAA CGGCGACACC
ATCCAGGGCA CCGCGCTGTC GGATTACCAG GCCATGGTGA GCCCCATCAC CTGCGACCAG
ACGCTGGCGA TCTACAAGGT AATGAACGCC GCCAAGTACG ACGGCGGCGG TATCGGGAAC
CACGAGTTCA ACTATGGCCT GCCGTATCTG TCGCAGGTCA CGGGCAATAC GTTCAACGTC
GATGGCCTGC CCGATCCGGC CACGCAGCAG AAATGCGCAG GCCCGGCCTT CCCGCAGGTG
CTGGCCAACG TGGTGAGCGC GAAGACCAAC GCGCCGCTCT TCCAGCCGTA CACGATCATC
ACCAAGACGG TAACGGCCAC GGCGCCGGAT GGCAGCACGA TCAGCGCGCC GGTCAAGGTC
GGCATCATCA GCTTTACGCC GCCCACCATC ACGAGCTGGG ACAAGCGCTG GCTCGACGGC
AAGGTCTACA CCGTCGGCAT CAAGGAAACG GCGGCCAAGT ACATCCCCGA GATGCGCGCA
AAGGGCGCCG ACCTGGTGGT CGCGATTTCG CACGGTGGGC TGGATAACTC GACGTATTCG
CCGACGATGG AAAACGGCAG CTGGTGGCTG TCCACCGTGC CGGGCATCGA CGCCATGTTG
ATCGGCCACT CGCACCAGCT CTTCCCGGAT GCAAAGAGCA CGGTCAGCCA GTTCAACCTG
CCGGGTGTGG ACAAGGTGGC CGGCACCGTG AACGGCGTGC CGACTGTGAT GGCCAACTAC
TGGGGCAAGC ACCTCGGCGT GATCAAGCTG GGCCTGACGT TCAACGGCAC GAACTGGGCC
GTGGACAAGA CGCAGACCAC GGTGGAAGCG CGCTCGATTC AGAACGCCGA CAAGACGTAC
GTAGCGGCCG ACCCGACGGT CTCGGCCGCC ATCGCCACCG AACACCAGGC GACGATCAAC
TACGTGAAGA CGCCGGTGGG CAGCACCGAC TTCAACATGA GCACGTACTT TGCCGACGTG
GGCGACCCGG GCGCAATCGA GATCGTGAAC CAGGCGCAGG CCGATTACGT GTCGGCGTAC
ATCCAGGCGA ACCTGCCGCA GTACGCGTCG CTGCCGGTGC TGTCGGTGAG CGCGCCGTTC
AAGAGCGGCT TTGGCGGCGG TACGGATTTC ACCGATGTTG CAGCCGGCCC GCTGGCGATC
AACAACGCAG CCGACCTGTA TCTGTATCCG AACACGGTCT ACGCCGTGAA GGTGGCGGGC
TCCGACATCA AGAACTGGCT GGAAACGGCA GCCAAGCGCT TCAACACCAT CGACCCGACG
CAGGCGACGG TGCAGAAGCT GGTGAGCACG TTCCCAGGCT ACAACTTCGA CATGTTCACC
ACGCCGGACC TGACGTATGA GATTGACGTC ACGCAGCCGG TCGGCAGCCG CATCAAGAAC
CTGATGTACA AGGGCGTGGC GCTCGACCCG GCAGCGCAGT TCATCGTGGC GACCAACAAC
TACCGCGCAA GCGGCGGCGG CAACTTCCCG GGCCTGGATG GCAGCAAGAC GATCTACGCG
TCGCCCGATG CCAACCGCGA CGTGCTGATC AGCTACATCA AGAAGATCGG CAGCGTGAAG
CGGGCGACGA ACGGCTCGCA GCGCAGTTGG CGCTTCACGA AGCTGGCGAG CTCGGTGGCG
CAGGTGCAGT TCACCTCTGC GCCCAACAAG CTGGCCAACG CCACGGCCGC CGGCATCACC
AACGTCACAC AGGTGGCTGC GGATGACGGT TCGGGCAAGG GCTTGGCGGT GTACCAGATC
GACCTGACGC AGTAA
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| Protein sequence | MRVRPLCSAA LPLAVFLSMS LAACGGSDDT PTTPAASAAP AGTKATLAVL ETTDLHTNVL
SYDYFKLAAD NSLGFERVAT LINQARTQFP NTLLLDNGDT IQGTALSDYQ AMVSPITCDQ
TLAIYKVMNA AKYDGGGIGN HEFNYGLPYL SQVTGNTFNV DGLPDPATQQ KCAGPAFPQV
LANVVSAKTN APLFQPYTII TKTVTATAPD GSTISAPVKV GIISFTPPTI TSWDKRWLDG
KVYTVGIKET AAKYIPEMRA KGADLVVAIS HGGLDNSTYS PTMENGSWWL STVPGIDAML
IGHSHQLFPD AKSTVSQFNL PGVDKVAGTV NGVPTVMANY WGKHLGVIKL GLTFNGTNWA
VDKTQTTVEA RSIQNADKTY VAADPTVSAA IATEHQATIN YVKTPVGSTD FNMSTYFADV
GDPGAIEIVN QAQADYVSAY IQANLPQYAS LPVLSVSAPF KSGFGGGTDF TDVAAGPLAI
NNAADLYLYP NTVYAVKVAG SDIKNWLETA AKRFNTIDPT QATVQKLVST FPGYNFDMFT
TPDLTYEIDV TQPVGSRIKN LMYKGVALDP AAQFIVATNN YRASGGGNFP GLDGSKTIYA
SPDANRDVLI SYIKKIGSVK RATNGSQRSW RFTKLASSVA QVQFTSAPNK LANATAAGIT
NVTQVAADDG SGKGLAVYQI DLTQ
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