Gene Rpic_3557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3557 
Symbol 
ID6286256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3724281 
End bp3725105 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content63% 
IMG OID642627141 
Productaldolase II superfamily protein 
Protein accessionYP_001901108 
Protein GI187930621 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTGT TTTCGCTTTC GCCCGATTCC GGTTCGGACA TCCAAGCCCA TCGCCCGACC 
TGGTGCGGCC CAAGAGAATG GGGGGCGCGC GTGAAGCTGG CGGCGTGCTA TCGCATCTTT
GCGCAGCTGG GCTGGACCGA ACTCATCTAC AACCACATCA CGCTGCGCCT GCCACCCGAA
GATGGCAGCG CCGACGATGG CGGCCCGCAT TTCCTCATCA ACCCGTTCGG CCTGACCTAT
GCAGAGGTTT GCGCGTCGAA CCTCGTGAAG ATCGACCTGC AGGGCAATGC GCAGCGCGCG
CCGGGTCAGC CGGACTGGCC CGTCAACCCG GCCGGCTTTA CCGTGCATGC CGCCATTCAT
GCGGGTATTC CGGGTGCGCA TTGCGTGATG CACACCCACA CGACCGCCGG CATGGCCGTC
GCCTGCGCGC GCGATGGTCT GTCGATCAGC AATTTCTATG CGGCGCAGTT GCACGGCAAG
GTCGCGTATC ACGACTTCGA GGGCATCACC GTGCATGCCG ATGAAGGGCC GCGCCTGGTC
AGGAACATCG GTGACAAGCC CGCGGTCATC TTGCGCAACC ACGGGCTGCT GGCTTGGGGC
GATTCGATTG CGCGGGCGTT TGCGGTGCTG TGGCTGCTCA ACCGCGCATG CGACATCCAG
CTCGCTTCCA CATCGATGGG CCCGGTGTTG GAGATTCCCG AAGCGATTGC GCGCAACTGC
ACGCGCGATT CGCTGCAGTT CAACCCAAAC TTTGGCGCAG GCGAAGATGT GTTCGCAGCA
CTGATGCGCA CCATCGACCG CATCGATCCT TCTTTCCGAA CCTGA
 
Protein sequence
MTVFSLSPDS GSDIQAHRPT WCGPREWGAR VKLAACYRIF AQLGWTELIY NHITLRLPPE 
DGSADDGGPH FLINPFGLTY AEVCASNLVK IDLQGNAQRA PGQPDWPVNP AGFTVHAAIH
AGIPGAHCVM HTHTTAGMAV ACARDGLSIS NFYAAQLHGK VAYHDFEGIT VHADEGPRLV
RNIGDKPAVI LRNHGLLAWG DSIARAFAVL WLLNRACDIQ LASTSMGPVL EIPEAIARNC
TRDSLQFNPN FGAGEDVFAA LMRTIDRIDP SFRT