Gene Rpic_3554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3554 
Symbol 
ID6287345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3721624 
End bp3722163 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content63% 
IMG OID642627138 
Productnuclear protein SET 
Protein accessionYP_001901105 
Protein GI187930618 
COG category[R] General function prediction only 
COG ID[COG2940] Proteins containing SET domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCA CGTCCCCTGA TGCCGCACCG GCTCTGGCTG AGTCCTCGCC CACGCCGGAA 
GCGCCGGCCA AACTGCGCCG CCGCGATCGC ATTGAGGTGC GTGAATCTGG TGTGCACGGA
CGTGGTGTCT ATGCTGTGGT CGCGATCGCA CGCGGCAAGA AGATCATCGA ATACAAGGGC
GAGCACATCA CGTGGAAGGA GGCACTGCGC CGCCATCCGC ATGACCCGTC CGATCCGAAT
CACACGTTCT ACTTCAGCCT GGAAGACGGC AGCGTGATCG ACGCCAAGTT CGGCGGCAAC
CGCGCGCGCT GGATCAACCA CGCCTGCAAG CCGAACTGCG AAGCGCGGGA AGAGGATGGT
CGCGTGTTCA TTCATGCGCT GCGCGATATC GAACCTGGCG AAGAGCTGTT CTACGACTAC
GGCCTCGTCA TCGAAGGTCG GCAGACCAAG GCACTGAAGG AACAGTTTGC TTGCCGCTGC
GGCGCGAAGA GGTGCCGCGG CACGATGCTG GCGCCGCCCG CGAAGACCAA GAAGAAGTAA
 
Protein sequence
MTRTSPDAAP ALAESSPTPE APAKLRRRDR IEVRESGVHG RGVYAVVAIA RGKKIIEYKG 
EHITWKEALR RHPHDPSDPN HTFYFSLEDG SVIDAKFGGN RARWINHACK PNCEAREEDG
RVFIHALRDI EPGEELFYDY GLVIEGRQTK ALKEQFACRC GAKRCRGTML APPAKTKKK