Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3554 |
Symbol | |
ID | 6287345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 3721624 |
End bp | 3722163 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642627138 |
Product | nuclear protein SET |
Protein accession | YP_001901105 |
Protein GI | 187930618 |
COG category | [R] General function prediction only |
COG ID | [COG2940] Proteins containing SET domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGCA CGTCCCCTGA TGCCGCACCG GCTCTGGCTG AGTCCTCGCC CACGCCGGAA GCGCCGGCCA AACTGCGCCG CCGCGATCGC ATTGAGGTGC GTGAATCTGG TGTGCACGGA CGTGGTGTCT ATGCTGTGGT CGCGATCGCA CGCGGCAAGA AGATCATCGA ATACAAGGGC GAGCACATCA CGTGGAAGGA GGCACTGCGC CGCCATCCGC ATGACCCGTC CGATCCGAAT CACACGTTCT ACTTCAGCCT GGAAGACGGC AGCGTGATCG ACGCCAAGTT CGGCGGCAAC CGCGCGCGCT GGATCAACCA CGCCTGCAAG CCGAACTGCG AAGCGCGGGA AGAGGATGGT CGCGTGTTCA TTCATGCGCT GCGCGATATC GAACCTGGCG AAGAGCTGTT CTACGACTAC GGCCTCGTCA TCGAAGGTCG GCAGACCAAG GCACTGAAGG AACAGTTTGC TTGCCGCTGC GGCGCGAAGA GGTGCCGCGG CACGATGCTG GCGCCGCCCG CGAAGACCAA GAAGAAGTAA
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Protein sequence | MTRTSPDAAP ALAESSPTPE APAKLRRRDR IEVRESGVHG RGVYAVVAIA RGKKIIEYKG EHITWKEALR RHPHDPSDPN HTFYFSLEDG SVIDAKFGGN RARWINHACK PNCEAREEDG RVFIHALRDI EPGEELFYDY GLVIEGRQTK ALKEQFACRC GAKRCRGTML APPAKTKKK
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