Gene Rpic_3548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3548 
Symbol 
ID6286765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3716955 
End bp3717431 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content64% 
IMG OID642627132 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_001901099 
Protein GI187930612 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.621561 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCGC TTGATACCTT CGATCTGGCT CTGCTGGCGG CCCTTCAGCG CGATGGCCGT 
GCGACGCATC AGCAGCTCTC GGAGCAAGTC CACCTGTCGG CCAGCCAAGT CGGGCGGCGC
CTGGCGCGGC TTGAATCGGA AGGCGTGATC GAGGGCTACC GGGTGGTGCT CTCGCCGACC
GGGCTGGGGC TGGGCGTGAC GGTGTTCGCG AGCGTCAAGC TGGCGCACCA CGGCGACGCC
ATCGTCGAAC GCTTTCATGA AGAGATCAGC CTGCTCGACG CGGTGCAGGA GTGCTATTCG
GTGGCGGGCG ACGCCGACTA CATGCTGCGC GTGGTGGTGC CCGATCTGCC CGCGCTGTCG
GAATTCGTCA TGCGCAAGCT GATGCGTGTG CCGGGTGTGG ACAATGTACG TTCCAATATC
GTACTGACGG CCTTGAAGCG GGATGGCGCG TTGCCGCTAT CCCACCTTGG TGGGTAG
 
Protein sequence
MISLDTFDLA LLAALQRDGR ATHQQLSEQV HLSASQVGRR LARLESEGVI EGYRVVLSPT 
GLGLGVTVFA SVKLAHHGDA IVERFHEEIS LLDAVQECYS VAGDADYMLR VVVPDLPALS
EFVMRKLMRV PGVDNVRSNI VLTALKRDGA LPLSHLGG