Gene Rpic_3543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3543 
Symbol 
ID6286427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3711492 
End bp3713714 
Gene Length2223 bp 
Protein Length740 aa 
Translation table11 
GC content69% 
IMG OID642627127 
Productheavy metal translocating P-type ATPase 
Protein accessionYP_001901094 
Protein GI187930607 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.415996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCG CCAGCCTTGC CGACGTGACC TCCACCGACC TCGATATCAG CGGGATGACG 
TGCGCGGCTT GTGCGGGCCG GGTCGAACGT GCCTTGCGCG CCGTGCCAGG CGTGACCGAA
GCCAGCGTGA ATCTCGCGAC CGAGCGCGCT CGCGTGCAGG GCGGTGCCGG CAGCGATGCA
CTGATCGCCG CAGTCTCTGC CGCCGGGTAC GAGGCGCGCG TCGCTTCCGA TGAAACCGCC
GCCTCCGTTG TTGCCGAACC CGACTTCTGG GAAGGTGCCG GCCCCGTGTG GATTGCCGCC
GCCCTGTCCG TGCCGCTCGT GTTGCCCATG ATCGCAGGGT GGTTCGGCGG CGGCTGGATG
CTGCCTGCGT GGGTGCAGTG GCTGCTGGCG ACGCCGGTGC AGTTCGTGAT TGGCGCGCGC
TTCTACAAGG CGGGCTGGAA GGCGCTGCGT GCGCGTGCCG GCAATATGGA CCTGCTGGTC
GCGCTCGGCA CGTCGGCGGC GTATGGGCTG TCGCTGTGGC TGTGGTGGCG CGCCGGTGCG
GACGGGATGC ACCATGCGCC GCACTTGTAC TTCGAAAGCG CCGCCGTGGT CATCACGCTG
GTGCGGCTTG GCAAGTGGCT GGAAGTGCGT GCCAAGCGCC AGACCGCGCA GGCCATCCGT
GCCCTGCAGG CGCTGCGCCC CGATACCGCT CGCGTGCGCA GCGCCGATGG CACGCTGCGC
GATACCCCGG TCGCCCAGGT GCGCGTGGGC GATGTGGTGT CCGTGCGTGC CGGTGAACGC
ATCCCCGTGG ATGCCGTGGT GCTGGAAGGC GCGAGCCACG TCGATGAATC CATGCTGACC
GGCGAAAGCC TGCCCGTGCC CAAGCACGAA GGCGACCGCG TGACCGCAGG CGCCATCGCC
ACCGACGGCG TGCTGCTCGT GCGCACCACG GCCATCGGCG CGGACACGAT GCTTTCGCGC
ATCATCCGCC TTGTGGAAGA CGCGCAGGCC GCCAAGCCGC CGATCCAGCA ACTGGTCGAC
CGCGTGAGCG CCATCTTTGT GCCGGCGGTG CTGGTGGCGG CCCTGCTCAC GCTGGCCGGT
TGGTTCATCG CTGGTGCGGG GTGGGAGACG GCCATCGTCA ACGCCGTGGC CGTACTGGTG
ATTGCCTGCC CGTGTGCGCT CGGCCTTGCC ACGCCGTCTG CCATCATGGC CGGCACGGGT
GCGGGCGCGC GGCGCGGCAT TCTCATTGCC GATGCGCAGG CGCTCGAACG CGCCCAGCAG
GTGGATTTCG TGGTCTTCGA CAAGACCGGC ACGCTCACCG TCGGCCAGCC GCGTGTGACG
GCGGTGGAAG CGGCATCCGG CGTCGACACC GACACGCTGC TCGACCAGCT TGCCGCGCTG
CAGGCTGAGA ACACGCACCC GCTGGCACAC GCTACGCGTG AATATGCGAT GGAGCGGGGC
CGTGCAATCA CGCCCGCGCA ATCGCCGGAA GTGTTGGCGG GGCGCGGCAC GCGCGGCATC
GTGAATGGCG CATCGCTGCA ACTCGGCAAT GCGCGGTGGA TGGACGAACT GGGACTGGAT
CGCGGCGCAT TGCAAACGCG TGCCGATGCG CTGGAGGCGC AGGGCAACAC CGTCTCGTGG
CTTGCGCAGC GTGATGAAGG CGGGGTGCAA CTGCGGGGCC TGATTGCGTT TGGCGATGCG
CTCAAGCCCG GTGCCAAGGA GGCCGTAGCG GCGCTGCAGA CGCGGGGCGT GCGCACCGCG
CTCGTGACGG GGGACAACGC CGGCGCCGCG CACAGCGTGG CGCACGCGCT CGGCATCGAC
GAAGTGGCCG CGCAAGTGCT GCCGCAAGAC AAGGCCGCGC GTGTGACGGC TTGGCAGCAG
AGCGGCCATG TGGTGGCGAT GGTGGGCGAT GGCATCAACG ATGCGCCCGC GTTGGCGGCG
GCCGACGTCG GCATCGCCAT GGCCACGGGC ACCGATGTGG CGATGCAGGC CGCCGGTATC
ACACTCATGC GCGGCGAGCC GCGCCTGGTG AGCGATGCGC TGGACCTGTC GCGCCGCACC
GTCGCCAAGA TTCGCCAGAA CCTGTTCTGG GCTTTCATCT ATAACGTGGT GGGCATTCCA
CTGGCGGCAT TCGGCTTGCT GAACCCCACG TTTGCCGGCG CGGCAATGGC GTTCTCCAGT
GTGAGCGTGG TCACCAATGC GCTGATGCTG CGCCGCTGGC GCGCCACCGG AGACAACGCA
TGA
 
Protein sequence
MTAASLADVT STDLDISGMT CAACAGRVER ALRAVPGVTE ASVNLATERA RVQGGAGSDA 
LIAAVSAAGY EARVASDETA ASVVAEPDFW EGAGPVWIAA ALSVPLVLPM IAGWFGGGWM
LPAWVQWLLA TPVQFVIGAR FYKAGWKALR ARAGNMDLLV ALGTSAAYGL SLWLWWRAGA
DGMHHAPHLY FESAAVVITL VRLGKWLEVR AKRQTAQAIR ALQALRPDTA RVRSADGTLR
DTPVAQVRVG DVVSVRAGER IPVDAVVLEG ASHVDESMLT GESLPVPKHE GDRVTAGAIA
TDGVLLVRTT AIGADTMLSR IIRLVEDAQA AKPPIQQLVD RVSAIFVPAV LVAALLTLAG
WFIAGAGWET AIVNAVAVLV IACPCALGLA TPSAIMAGTG AGARRGILIA DAQALERAQQ
VDFVVFDKTG TLTVGQPRVT AVEAASGVDT DTLLDQLAAL QAENTHPLAH ATREYAMERG
RAITPAQSPE VLAGRGTRGI VNGASLQLGN ARWMDELGLD RGALQTRADA LEAQGNTVSW
LAQRDEGGVQ LRGLIAFGDA LKPGAKEAVA ALQTRGVRTA LVTGDNAGAA HSVAHALGID
EVAAQVLPQD KAARVTAWQQ SGHVVAMVGD GINDAPALAA ADVGIAMATG TDVAMQAAGI
TLMRGEPRLV SDALDLSRRT VAKIRQNLFW AFIYNVVGIP LAAFGLLNPT FAGAAMAFSS
VSVVTNALML RRWRATGDNA