Gene Rpic_3532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3532 
Symbol 
ID6288513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3701464 
End bp3702222 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content66% 
IMG OID642627116 
Productprotein of unknown function DUF81 
Protein accessionYP_001901083 
Protein GI187930596 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0267521 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTCG CTTTGCTCGC CGTGGCCGGC TTTCTGGCCG GCCTGATCGA TGCCGTAGCC 
GGTGGCGGCG GCCTAGTGCA GATTCCCGCC CTGTTCTCTG CGTATCCGAA CATCGCGCCC
GCTACGCTCA TCGGTACGAA CAAGGTCGCG TCGATGTCGG GCACCGCGAC GGCGGCGGTG
CGCTACGGCC GCACGGTGCG CATCTATTGG GGCGCGACGG CACCGGCGGT GGTCACCGCG
TTTATGTTTT CGCTACTGGG CGCGTGGGCG CTCATGCATA TTCCCGCCGA ACCGCTGCGC
CGTGCGCTGC CGTTCGTGCT GGCGGTGCTG CTCGTCTACA CGGTGGCCAA GAAGAATCTG
GGCGCCGATC ACGCCCCGAG CCTCCAGGGC TGGCGCGAGC GGGCGACGGC GTTGCTGGCT
GGCGCCGCCA TCGGTTTCTA CGACGGCGTC TTCGGCCCGG GCACCGGCAG CTTTCTGATG
ATCGTGTTTG TGCGCGTGTT TGGGTACGAC TTTCTGCACG CGTCGGCGTC CACCAAGATC
GTGAATCTGG CGACCAACGT GGCGGCCCTG TTACTGTTGG CCGCCAAGGG CCACGTGTGG
TGGCAGCTTG GCGTGGTGAT GGCAGTCGCC AACGTGGCCG GCAATCAGGT CGGCAGCCAC
CTCGCGTTGC GGCACGGCAG CCGCTTCGTG CGCAAGGTGT TCATCGTGGT GGTGCTGGCG
TTGATTTTGA AGACGGCTTA CGACGCGTTC ATCCGTTGA
 
Protein sequence
MEFALLAVAG FLAGLIDAVA GGGGLVQIPA LFSAYPNIAP ATLIGTNKVA SMSGTATAAV 
RYGRTVRIYW GATAPAVVTA FMFSLLGAWA LMHIPAEPLR RALPFVLAVL LVYTVAKKNL
GADHAPSLQG WRERATALLA GAAIGFYDGV FGPGTGSFLM IVFVRVFGYD FLHASASTKI
VNLATNVAAL LLLAAKGHVW WQLGVVMAVA NVAGNQVGSH LALRHGSRFV RKVFIVVVLA
LILKTAYDAF IR